Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0195 ATGGAAAAGGCAGTTACGATCCGGACTAAGAAGTTCCTCACCAACAGGCTGCTTTCACGAAAGCAATTCGTTGTTGAAGCTAATCATCCAGGGAAACCTAATGTTTCTAGGGTTGAGCTTAAGGAAAAACTGGCAACAATGTATGGAGTGAAGGACAATGCTGCTGTGTTCGTCTACGGATTCCGAACTCAATTTGGAGGTGGCAAATCAACTGGTTTCGGTTTGATTTATGATTCTGTTGAGAGTGCAAAGAAGTATGAGCCTAAGTACAGGCTTATTAGGAATGGTCTTGACACCAAAGTTGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTATGAAGATTCGTGGTGTGAAGAAGACCAAGGCCTCTGATGCTGCTAAGAGTGGAAAAAAGAAATAA 411 0.4209 MEKAVTIRTKKFLTNRLLSRKQFVVEANHPGKPNVSRVELKEKLATMYGVKDNAAVFVYGFRTQFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAMKIRGVKKTKASDAAKSGKKK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0195 136 MobiDBLite consensus disorder prediction 101 136 - -
Tpr6g0195 136 Pfam Ribosomal protein S24e 24 102 IPR001976 GO:0003735|GO:0005840|GO:0006412
Tpr6g0195 136 ProSitePatterns Ribosomal protein S24e signature. 65 87 IPR018098 -
Tpr6g0195 136 PANTHER 40S RIBOSOMAL PROTEIN S24 2 136 - -
Tpr6g0195 136 Hamap 30S ribosomal protein S24e [rps24e]. 3 105 IPR001976 GO:0003735|GO:0005840|GO:0006412
Tpr6g0195 136 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 5 107 IPR012678 GO:0003735|GO:0005840|GO:0006412
Tpr6g0195 136 Gene3D - 1 131 - -
Tpr6g0195 136 PANTHER 40S RIBOSOMAL PROTEIN S24 2 136 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0195 Tpr-Chr6 1615228 1617278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0195 2 131 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 75.385 5.83e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0195 K02974 - sind:105163278 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0195 6 1615228 1617278 Tpr6g0195 6 1615228 1617278 ECH