Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0193 ATGAATGGTGAAACAGATGACTCTGACTTTGTTGAAGTTGATCCAACCGGTAGATATGGCAGATACAATGAAGTTCTTGGTAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGAATTGAAGTTGCTTGGAATCAAATCAAACTATATGATTTCTTGCAAAACCCCGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTTCTCAAGACATTGAAACATAGAAACATTATGAAATTTTACACATCTTGGGTTGATACTGCAAATAGGAATATCAATTTTGTCACTGAATTGTTTACTTCTGGTACTCTTAGACAGTATAGGCAAAAGCACAAGAGGGTTAACATAAGAGCGGTGAAGCATTGGTGTAGACAGATCCTACAAGGACTTCTATATCTTCATAGCCATGATCCGCCGGTGATCCATAGAGATCTTAAATGTGATAATATTTTCATTAATGGTAACCAAGGGCAAGTTAAGATTGGGGATCTTGGTTTGGCTGCGGTTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGAACGCCCGAATTCATGGCACCAGAAGTATACGAAGAGGACTATAATGAACTAGTTGACATATATTCCTTTGGTATGTGTGTATTAGAAATGGTTACATTTGAATATCCTTACAGTGAATGCAGCCATCCAGCACAAATCTACAAGAAAGTTTCTTCTGGGAAAAAACCAGATGCTTTGTATCAAGTGAACGATCCAGAAGTACGAGAATTCATTGAGAAATGCCTAGCAACGGTGTCTCTAAGACTCTCTGCAAGGGAGCTTCTGGATGATCCTTTTCTTCGAATTGATGATGACGAATATGATTTGAGATCGGTAGATGTTGAAGAGTTTGGTGACTTGGGTCCTCTCGTTTGTCAGTCATTCCTTTCACTCGACCGTAGCTATAGTAACATAAGTACTGAATATTCAAATGGGTTTGGGTATGAAGTAGATTGGTATTCTCAACCAGCTGAGATTGAACATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCCAAAGATGTTGACATAAGCATCAAAGGCAAGAAAAAAGACGACGGTGGCATCTTTTTGAGACTAAGAATGGCAGACAAAGAAGGTCATATCCGAAACATTTATTTCCCATTCGACATAGAGTTGGACACAGCATTAAGCGTAGCAACTGAAATGGTTGCGGAACTAGATATTACAGATCAGGATGTTACCAGCATAGCTGGTATGATAGATGGAGAAATTGCTTCCTTGGTACCGGAATGGAGAACAGAACCAGGAATCGAGGAAACCACCAACTATGAAAATCAAAGTTTCTGCGACAATTGTGTGTCTAGTCATACTACAGTTACAGATTTTCTTTTACATAATGAAGGTGGAAAAAACTTGCAGCTTCGTCAATGCTGCACACACGGATGTACTTCAATGCACGGCCGGTTTGAGGAGATTACATACCCATCTGAGGAGTATGACGACAACCACATTAGCGAAGATACACCTAACATGTCAAGTGAATCAGACTTCTTGCAGTATCAGGAATCATGGGATCATCACGAAAGCCGTGAACTTAGTCCTGTAGAGTCTACTCGAAGCCATTCGGGTGAACAATATGAACTATTAGATAAATCACCGTTGACTGAAGATAAAAGAGAGGCTGTATGGGAAAACGGTTTCGCACCCAACGCAGGAAACTCCTTGACAAATTTATCAGGAAACAATTATTTGTCAACTGTTGATTCGCTATATTGTGGAGTCAAGAGCGATTATGAGAACGAGATCCAACATGAGTTGAGGTGGCTCAAAGCAAAATATCAAATGGAGTTAAGGGAACTTAGGGATAAACAATTGGATCTAGAAGCTAAATCTCCACATATTACTAGTAACCACGAAACAACAGCTGAAACAGTAAACGGATTCGATAACCGTATTCACTTTGATAATTACGGGAACTATGATTCTAGTTACCATTCTCAAGAACACAAGAGCCACCCCAATTTGGACACCCGAAGGGCCCAAAATTGCGCGATGACATGTTCTGATGAAGATGTGGTAACTGCAAAGAGTTTTTACACAAGGTTATTGCTTCCAGATACACTACATAGAACTGTTTCCCTCCCTGTTGATGCTGTGGATGTATAA 2166 0.4003 MNGETDDSDFVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYQGIEVAWNQIKLYDFLQNPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRQKHKRVNIRAVKHWCRQILQGLLYLHSHDPPVIHRDLKCDNIFINGNQGQVKIGDLGLAAVLRKSHAAHCVGTPEFMAPEVYEEDYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYQVNDPEVREFIEKCLATVSLRLSARELLDDPFLRIDDDEYDLRSVDVEEFGDLGPLVCQSFLSLDRSYSNISTEYSNGFGYEVDWYSQPAEIEHGIELFECHDDEPSKDVDISIKGKKKDDGGIFLRLRMADKEGHIRNIYFPFDIELDTALSVATEMVAELDITDQDVTSIAGMIDGEIASLVPEWRTEPGIEETTNYENQSFCDNCVSSHTTVTDFLLHNEGGKNLQLRQCCTHGCTSMHGRFEEITYPSEEYDDNHISEDTPNMSSESDFLQYQESWDHHESRELSPVESTRSHSGEQYELLDKSPLTEDKREAVWENGFAPNAGNSLTNLSGNNYLSTVDSLYCGVKSDYENEIQHELRWLKAKYQMELRELRDKQLDLEAKSPHITSNHETTAETVNGFDNRIHFDNYGNYDSSYHSQEHKSHPNLDTRRAQNCAMTCSDEDVVTAKSFYTRLLLPDTLHRTVSLPVDAVDV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0193 721 Coils Coil 610 630 - -
Tpr6g0193 721 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0193 721 Gene3D - 366 453 - -
Tpr6g0193 721 MobiDBLite consensus disorder prediction 528 553 - -
Tpr6g0193 721 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0193 721 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Tpr6g0193 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 4 710 - -
Tpr6g0193 721 SUPERFAMILY Protein kinase-like (PK-like) 23 278 IPR011009 -
Tpr6g0193 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Tpr6g0193 721 Gene3D Transferase(Phosphotransferase) domain 1 103 282 - -
Tpr6g0193 721 CDD STKc_WNK 18 277 - -
Tpr6g0193 721 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0193 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 710 - -
Tpr6g0193 721 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 422 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0193 Tpr-Chr6 1592726 1596254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0193 123 720 MAP Kinase Kinase Kinase AT3G04910 52.960 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr6g0193 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0193 K08867 - gmx:100790554 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0193 6 1592726 1596254 Tpr6g0193 6 1592726 1596254 ECH
Tpr6g0193 6 1592726 1596254 Tpr1g1526 1 14030740 14034517 PCT