Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0185 ATGGGGAAGGCAAGTAAATGGATTAGAAACCTTCTTTTAGGGAAAAAAGAAGAAAACTTGAAGCAGATTGATACGTTCTGCTCCGAGAATAAGACCACAAACACGGTTAATAGTAGTAATAGTAGTAGTAATAAGATAGTAGTGAAGCGCAGATGGAGTTTTCGAAAACTAACAAGTGGAAGATCAACAGGAAAAGTAGTAGCTCATAAAATTTCCAAGTCTTTTGATTCAGTTGACTCTCCAAAATTGCAAATACAAGCCTTAATGTTCCAAAGTCAGACCCCAAGAACAGCTGCTGAATTTGTAAGAACAGCTGCTACAAGGATTCAAGCTTCCTTCCGCTCTTATTTGGCAAGGAGAGCATTGCATGCTTTAAGAGGATTAGTGAAGTTACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCAACGCTGCGTGGGATGCATGCGTTGATGTCCATACAAGTTCGAGCTCGAATTAAAAGGATTAAGATGGCAGAAGAAGTTATTCCCCCAGAAATACCAGTTTCTCAACACACAGAAAGTCCCTGCTTCGAAGAGTACATGACACAACCAAAACAACATCAAGATTCAAAGAATATGAATGTGGAAGAAATGTTAGAGGCATTGAGGAGTAGAAGTGGCCCAATAGATGTAAAGAGCAGAAAATATGATTCAATGGCATATTATTCAAAGAGCCAATCAATTTCAAAACGAGAAAATCAATTAAAGAATGAGAATCATAACAATAACAATAACAATACTACTACAATCATCACAGCACCAAACAGCCCAGAAAAATATTACAGAGACATGATTGATTATTTAAATCCAAGATCATCATCAATTTCATTATCAACATCTCAGCGCCACATGGTGCCTCCTCGACAATCATGGTCATCACCAAAAAATTACATGAGCAAGACAGAATCTTCAAAGGCAAAAACAAGGTCAAGTAGTGAACCAAGACAAAGACCTACCAAACAAGGAACAAAGCAAAAAAGCAACAACTCTATTGAATGTAGTACTACTAGTAGTAGTTCATTGAAGAAAAATATGTTGTCAAATTCAGCAAGGTATGATCATTGGGTTGTTAATTCAATGAAGGAGAGTAAGCGTGATTCCTTTTGA 1140 0.3728 MGKASKWIRNLLLGKKEENLKQIDTFCSENKTTNTVNSSNSSSNKIVVKRRWSFRKLTSGRSTGKVVAHKISKSFDSVDSPKLQIQALMFQSQTPRTAAEFVRTAATRIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEVIPPEIPVSQHTESPCFEEYMTQPKQHQDSKNMNVEEMLEALRSRSGPIDVKSRKYDSMAYYSKSQSISKRENQLKNENHNNNNNNTTTIITAPNSPEKYYRDMIDYLNPRSSSISLSTSQRHMVPPRQSWSSPKNYMSKTESSKAKTRSSSEPRQRPTKQGTKQKSNNSIECSTTSSSSLKKNMLSNSARYDHWVVNSMKESKRDSF* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0185 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 144 IPR027417 -
Tpr6g0185 379 MobiDBLite consensus disorder prediction 326 362 - -
Tpr6g0185 379 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Tpr6g0185 379 ProSiteProfiles IQ motif profile. 103 130 IPR000048 GO:0005515
Tpr6g0185 379 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 376 - -
Tpr6g0185 379 Pfam IQ calmodulin-binding motif 129 143 IPR000048 GO:0005515
Tpr6g0185 379 Pfam IQ calmodulin-binding motif 104 122 IPR000048 GO:0005515
Tpr6g0185 379 MobiDBLite consensus disorder prediction 287 316 - -
Tpr6g0185 379 MobiDBLite consensus disorder prediction 287 362 - -
Tpr6g0185 379 MobiDBLite consensus disorder prediction 249 266 - -
Tpr6g0185 379 Pfam Protein of unknown function (DUF4005) 298 355 IPR025064 -
Tpr6g0185 379 MobiDBLite consensus disorder prediction 234 266 - -
Tpr6g0185 379 Gene3D - 99 154 - -
Tpr6g0185 379 PANTHER IQ-DOMAIN 5-RELATED 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0185 Tpr-Chr6 1534854 1536922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0185 1 339 IQD Protein Family AT4G14750 33.705 6.77e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0185 - - gmx:100527816 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0185 6 1534854 1536922 Tpr6g0185 6 1534854 1536922 ECH