Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0174 ATGGTAACATATTTCTCCATTGAGGTAACATATTTGAGGATGGAGCTACCTTCAAACTTGTTATCTGATGAGGCAAGTCCAGAGTGGATGAACAAAGGAGACAACGCATGGCAATTAACAGCAGCAACAATGGTTGGGCTTCAAAGCATTCCTGGGCTAGTAATCCTATACGGAAGCCTAGTAAAGAAAACATGGGCCATAAATTCTGCTTTCATGGCCTTTTACGCTTTTGCAGCAGTTCTCTTATGTTGGGTTTCATGGGCTTACCACATGTCATTTGGGGACAAAATGGTATTTTTCTTAGGGAAACCAGGAATAGCATTGGATGAAAAGTTTTTATTAGGAAAAGCATTTTTGGGAAATTTTCCTAATGCTACAATGGTATTTTATCAAGGTGTATTTGCTGGTATTACTTTGATTTTGATAGCTGGTGCTTTACTTGGAAGAATGAATATTCGTGCATGGATGTTGTTTGTGCCACTTTGGGTTACATTTTCTTACACTGTTGTTGCTTTTAGTATTTGGTGTCCTGATGGATGGTTGGCTAAACGTGGTGTTATAGATTTTGCTGGTGGTTATGTTATTCATCTCTCTGCTGGTGTTGCTGGTTTCACTGCAGCTTATTGGGTTGGCCCTCGAGCAGAGAAGGACAGGGAAACATTTCCAGCAGCAGCAAACAACATGATAATGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGATTCAATGGTGGAGGTCCATTTGTTGCTAGTACCATTGCATCTCTTGCTGTCCTAAACACACACGTCTGTACTGCTGCTAGCATCGTCGTATGGATCACACTCGATACCTTCTACTTCGGTAAGCCCACCGTGTTTGGCGCCGTACAAGGCATGATCACCGGTCTCGTTTGTATCACACCCGCCGCAGGAGTTGTGCAGGGGTGGGCAGCAATCTTGATGGGTTTGATCTCGGGAAGTATTCCATGGTACACAATGATGGTACTCCACAACAAAGTTAATTTCTTAATGAAAATTGACGATCCCATGGCGGTGTTCCACACCCACGCAATAGCCGGTGCTCTTGGCGGAATTCTAACCGGTTTCTTTGCCGTGCCAAAATTATGTCGTCTCTTCTACATGGTGCCTGATTGGGAAAAATACATCGGCCTCGCCTATGGCCTACAAAATAGTGGTGCAACTCGAGCGGGTTTGAAACAAATGTTGATCCAAGTTGAAGCCATAGTTTTTGTGATTTGCTACAATGTTATTGTGACTAGTTTGATTTGCTTGGTTGTGAGAGTCATGGTACCACTTAGGCTTGATAGTGATGCATTGCAAATGGGTGATAGGGTAATTCATGGAGAGGATGCTTTTGCCTTGCATAGTGAGACAACTAAATTTGTGAACATTAAGCGAAATAAGATTTATGATACACAAGCTTTCTCGTCCAATTATGAGTCTAGGTCATTAGGTGAGGTTCAAATAGTGTGA 1482 0.4305 MVTYFSIEVTYLRMELPSNLLSDEASPEWMNKGDNAWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAAVLLCWVSWAYHMSFGDKMVFFLGKPGIALDEKFLLGKAFLGNFPNATMVFYQGVFAGITLILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPRAEKDRETFPAAANNMIMVLAGAGLLWMGWSGFNGGGPFVASTIASLAVLNTHVCTAASIVVWITLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGLISGSIPWYTMMVLHNKVNFLMKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNSGATRAGLKQMLIQVEAIVFVICYNVIVTSLICLVVRVMVPLRLDSDALQMGDRVIHGEDAFALHSETTKFVNIKRNKIYDTQAFSSNYESRSLGEVQIV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0174 493 ProSitePatterns Ammonium transporters signature. 188 213 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tpr6g0174 493 PANTHER AMMONIUM TRANSPORTER 14 493 - -
Tpr6g0174 493 Gene3D Ammonium transporter AmtB like domains 17 473 IPR029020 -
Tpr6g0174 493 PANTHER AMMONIUM TRANSPORTER MEP2 14 493 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr6g0174 493 Pfam Ammonium Transporter Family 36 454 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tpr6g0174 493 TIGRFAM amt: ammonium transporter 34 454 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr6g0174 493 PRINTS Rhesus blood group protein signature 131 147 IPR002229 GO:0005887
Tpr6g0174 493 PRINTS Rhesus blood group protein signature 229 247 IPR002229 GO:0005887
Tpr6g0174 493 PRINTS Rhesus blood group protein signature 260 282 IPR002229 GO:0005887
Tpr6g0174 493 PRINTS Rhesus blood group protein signature 315 333 IPR002229 GO:0005887
Tpr6g0174 493 SUPERFAMILY Ammonium transporter 29 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0174 Tpr-Chr6 1462204 1465601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0174 125 488 Inorganic Solute Cotransporters AT2G38290 52.459 3.63e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0174 K03320 - gmx:100782944 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0174 6 1462204 1465601 Tpr6g0174 6 1462204 1465601 ECH