Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0171 ATGGAAAGAGTGTTTTCATTGGTTGAAATATCAGAGCAAGATTGGTTAACATTGAATGGGTGCAAAGAAAGAGATTCAAAGATGAATAGAAGTGAATCTGAATGGGCTTTAGAACAGTTTTTAAAACAAGATGCTGAAGAAACAAACAATACTTCAAATGCAATACCATGTAGTTCTTCTTCAACTTCAACTTCTTCTTCAACCGTTGATGTTAAACTTAACATAAACAATAACAATAATAATAATGATACTGTTTCTCTCAAGACCAAGCTTGATCTTGCCTGCGCCGCTGTTGCTAAGCAATTGGGATCTTTGGTCAACTCTAACGATCCTGACAATGGATCACTGGCATCTCATCCACCTCTTCCTGCTTTAAAAGAATCTGGCCCTTCTGGAAATGATCCATCTAAATTTCAAAATAAAGATGTGAAAGTAGCTGCTGGAGTTCCTTCCATGCAAAAGAAACCTGCTGTATCAATCAGGTCAACAACAAGTGGTTCATCAGATGGTGAAGAAGCTGAGGGAGAGAGTAATATGAATGGAGACATGAACCCTGATGCAAAAAGAGTTAGGAGGATGCTCTCTAATAGGGAGTCTGCGAGACGCTCGAGAAGAAGAAAGCAAGCTCATTTAACTGAGCTTGAAACGCAGGTCTCTCAATTAAGAGATGAAAATTCTTCATTGATACAGCGTTTATCAGATGTGAACAAAAAATACCGTGATTCTGACCATGAAAACAGAGTATTACAGGCTAAACTTGAAACATTAAGAGCACAGGTTCAGTTGGCTGAAGCTGAAGGGAGGTTTGTACGACGTCCTGGGTTGAATCCAATGGTGCGTCCTGGGTTGAATCCAATGGTTAATGCAATGCCTGAGATGTCATCAGTAATGGGAATGGAAATGTCATTATTTGATCGAAGCCCTTCTGAGTCATCAGCCGATGCATTTGTGCCCGTGCAAGAACATCGAAATAATAACTTTTTTCAACCAACTTCTGATAATCTTATGTCTGGTCGCGATATGAGAGGGGTCAATAATTGGTTGGGAGGCAATGTTTCGTCAGCTGAAAGTGTGCTGAAGAACACTCCAGCAGGTGGGAACGCGCTGACGAAGACAAGTAATAGAATAGTTTGA 1134 0.4021 MERVFSLVEISEQDWLTLNGCKERDSKMNRSESEWALEQFLKQDAEETNNTSNAIPCSSSSTSTSSSTVDVKLNINNNNNNNDTVSLKTKLDLACAAVAKQLGSLVNSNDPDNGSLASHPPLPALKESGPSGNDPSKFQNKDVKVAAGVPSMQKKPAVSIRSTTSGSSDGEEAEGESNMNGDMNPDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRDENSSLIQRLSDVNKKYRDSDHENRVLQAKLETLRAQVQLAEAEGRFVRRPGLNPMVRPGLNPMVNAMPEMSSVMGMEMSLFDRSPSESSADAFVPVQEHRNNNFFQPTSDNLMSGRDMRGVNNWLGGNVSSAESVLKNTPAGGNALTKTSNRIV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0171 377 Gene3D - 187 243 - -
Tpr6g0171 377 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Tpr6g0171 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 238 IPR004827 GO:0003700|GO:0006355
Tpr6g0171 377 Coils Coil 197 266 - -
Tpr6g0171 377 MobiDBLite consensus disorder prediction 147 187 - -
Tpr6g0171 377 PANTHER BZIP TRANSCRIPTION FACTOR 1 373 - -
Tpr6g0171 377 Pfam Basic leucine-zipper C terminal 255 364 IPR020983 -
Tpr6g0171 377 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Tpr6g0171 377 PANTHER BASIC LEUCINE ZIPPER 63 1 373 - -
Tpr6g0171 377 Pfam bZIP transcription factor 187 240 IPR004827 GO:0003700|GO:0006355
Tpr6g0171 377 MobiDBLite consensus disorder prediction 156 174 - -
Tpr6g0171 377 SUPERFAMILY Leucine zipper domain 188 238 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0171 Tpr-Chr6 1442568 1445933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0171 145 285 bZIP Transcription Factor Family AT5G24800 46.405 6.55e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g0171 bZIP_C 1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0171 K25784 - gmx:778137 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0171 6 1442568 1445933 Tpr6g0171 6 1442568 1445933 ECH
Tpr6g0171 6 1442568 1445933 Tpr1g1540 1 14249262 14255525 PCT