Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0163 ATGTATAGTTTCTCTTCAAACGTGCATAATATGCACACAAGTATATTGTTTTTTGTAGTTGGTATCTCTATTTTGTTGCATGGCATTCAAGGTGCATGGACAGAGGAGCCAGGTTCATTGATATTGGGTTGTGGGTTGGATGAAAAGGGAGCCAAAGATGATGATGGAAGACAATGGAGTCCTGATAATAAGTTCTTGGCAGCAGAAGCTGGTTCAATCACGTCTAAAGCCGCATACCAAGACCCTTCGCTGTCCGCTGTGGTTCCATACATGTCAGCTAGAGTTTTCACATCAGAAACAACATACAAATTTAATGTTAAACCTGATAAACGTTATTGGCTCAGGCTCCATTTTTATCCATCCCTTTATGGAAGTTACAACCCATTAGATTCATATTTCTCGGTGGCAGCAAATGGGGTTACCCTCCTCAGCAATTTCAGCGCTTACATCACTTGTGAGGCCCTATCACAGGCTTACATTGATAGAGAGTATTCCCTTGCTCCTTTGAATTCAGATACTTTGACTCTTACATTTAAACCTTCTGACAAACAACATGGAGCTTTTGCTTTCGTCAATGGCATTCAGTTGATCCCAATGCCCGAGTTGTTTGACTCTGCTGCATTGGTCGGGTATCCCGACCAAAACGTAGACGTCAAAACCATGAGTTTGCAAACCATGTTTAGACTAAACGTTGGTGGGCAGTATGTGTCTCCAGCCCAAGATTCTGGCCTTTCGAGGATGTGGTATGATGACACACCTTACTTATATGGTGCATCCACCGGTGTCACCAACCAAGCTTCCAAGAATGTCCGAATCACCTACCCAAACATGCCACAATACATTGCTCCTGAAACTGTCTACTCCACATCAAGATCAATGGGAGGTGATAAGAACGTTAACATGGGATACAACCTCACGTGGGTTTTCGAAGTTGATCCAAATTCTATGTACCTCGCGAGGTTGCATTTTTGTGATTATTATTATTCCAAGGTCAATGAGATTGTTTTCAATATCTTTGTCAACAATCAAACTGCACAGGCTCAAGCTGATGTTATTGCGTGGACAGGAGGTAAAGGCATGGCAACTTACAAGGATTTTGTGGTGTATGTCCAAGACGGTGAGGGGGCCGAGCAACTTTGGCTTGCACTGCATCCAGCACCTGAGACAATGCCAGAGTACTATGATGCCATACTCAATGGGGTAGAGATATTCAAGCTTAATGACACGGACTTGTCTGGCCCTAATCCTCAGCCTTCAGACATGCTTCTCGAAGATCAAGCAAAGGAAACGGGTTTCCAAACACACAGATCATATGATAAGAAAGCTGTCATTGGGGGAGCTGCTGGAGGTGCTGCAGGTGTTGCCTTTATGGCAGCAATATGCGTTGCTGTTTACCACAAGAAGAAAAGAGTTCCAGCGGCAGGGTCAGGGGGAGCCACACACACAAGTTGGCTTCCCATCTATGGAAATTCACACACAAATGGCAGTAAATCCACGTCCGGGAAGAGCATGGCCAGCGCAAACCTCGCTGCCATGGCTCAAGGTTTGTGTCGCTATTTTTCCTTGCAAGAGATAAAGCAAGCAACCAAAAATTTTGATGAGTCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGAAATTGATAACGGAGTGCTAGTGGCAATTAAGAGGTCAAATCCACAATCAGAACAAGGAGTCAATGAGTTCCAGACTGAGATAGAGATGCTTTCTAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATGATGAGATGTGCTTGGTTTATGACTACATGGCTCTTGGAACCTTTAGGGAACATTTGTATAAGGGCACCAAGCCTTTAAACATTTTAACGTGGAAGCAAAGATTAGAGATCTGCATTGGTGCTGCAAGAGGACTTCACTACCTTCACACAGGTGCCAAGTACACCATTATTCATAGAGATGTCAAAACAACAAATATTCTATTGGATGAAAACTGGAATGCCAAGGTATCAGATTTTGGGTTGTCAAAAACTGGTCCAGACTTGAATGCTGCTGGCCATGTTAGTACTGTGGTGAAGGGTAGTTTTGGCTACTTGGATCCCGAGTACTTTAGGAGGCAACAGTTGACTGAAAAGTCTGATGTCTACTCATTTGGGGTCGTCCTCTTTGAAGCCCTTTGTGCCAGGCCTGTTCTGAATCCTAGTCTTCCAAAAGAACAAGTTAGTCTTGCGGAATGGGCACTGCTCTGCAACCAAAAAGGAACGCTAGAGGATATTATTGACCCCAATCTCAAGGGAACAATAAATCCAGAAAGTTTGAAGAAGTTTGTGGACACGGCTGAAAAGTGTTTGTCTGATCATGGAACTGATCGTCCCTCCATGAATGATCTGTTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAAAACAAGGATGGTTCAACTAACTCTGCATCTCGAACTGATGAAAATGAGTTTGAAGAAATAAACTTAGGAGACAACGAAATGGCAAAACATTATAAGAACCTGAGCCTTGGAAGTCAGCATGACCTTAGCCAAGATTCTGAATCCAGTGAGAGTCCGACTAAAATTTTCACAGAACTTGTTAGTTCAAAAGGGCGATGA 2637 0.4338 MYSFSSNVHNMHTSILFFVVGISILLHGIQGAWTEEPGSLILGCGLDEKGAKDDDGRQWSPDNKFLAAEAGSITSKAAYQDPSLSAVVPYMSARVFTSETTYKFNVKPDKRYWLRLHFYPSLYGSYNPLDSYFSVAANGVTLLSNFSAYITCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKQHGAFAFVNGIQLIPMPELFDSAALVGYPDQNVDVKTMSLQTMFRLNVGGQYVSPAQDSGLSRMWYDDTPYLYGASTGVTNQASKNVRITYPNMPQYIAPETVYSTSRSMGGDKNVNMGYNLTWVFEVDPNSMYLARLHFCDYYYSKVNEIVFNIFVNNQTAQAQADVIAWTGGKGMATYKDFVVYVQDGEGAEQLWLALHPAPETMPEYYDAILNGVEIFKLNDTDLSGPNPQPSDMLLEDQAKETGFQTHRSYDKKAVIGGAAGGAAGVAFMAAICVAVYHKKKRVPAAGSGGATHTSWLPIYGNSHTNGSKSTSGKSMASANLAAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGEIDNGVLVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTFREHLYKGTKPLNILTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPDLNAAGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEQVSLAEWALLCNQKGTLEDIIDPNLKGTINPESLKKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENKDGSTNSASRTDENEFEEINLGDNEMAKHYKNLSLGSQHDLSQDSESSESPTKIFTELVSSKGR* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0163 878 MobiDBLite consensus disorder prediction 849 878 - -
Tpr6g0163 878 CDD STKc_IRAK 538 806 - -
Tpr6g0163 878 ProSiteProfiles Protein kinase domain profile. 532 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0163 878 SUPERFAMILY Protein kinase-like (PK-like) 511 808 IPR011009 -
Tpr6g0163 878 Gene3D Transferase(Phosphotransferase) domain 1 608 832 - -
Tpr6g0163 878 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Tpr6g0163 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tpr6g0163 878 Pfam Malectin-like domain 43 405 IPR024788 -
Tpr6g0163 878 SMART serkin_6 532 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0163 878 PANTHER OS07G0166700 PROTEIN 26 864 IPR045272 GO:0004714|GO:0006468
Tpr6g0163 878 Gene3D Phosphorylase Kinase; domain 1 492 607 - -
Tpr6g0163 878 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 864 - -
Tpr6g0163 878 MobiDBLite consensus disorder prediction 846 878 - -
Tpr6g0163 878 Gene3D - 221 407 - -
Tpr6g0163 878 Gene3D - 42 199 - -
Tpr6g0163 878 Pfam Protein kinase domain 533 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0163 Tpr-Chr6 1394762 1398448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0163 40 878 Receptor kinase-like Gene Family AT3G51550 52.806 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g0163 Malectin_like 6.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0163 - - mtr:MTR_7g115300 1530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0163 6 1394762 1398448 Tpr1g1556 1 14405051 14408696 PCT