Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0157 ATGGGGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGATCCAGATGTATCTTGGATTGATGGACAGGTTTCCAAAATCACCGGACAAGATGCGGAAATTGAAGCTACCAATGGAAAGAAGGTTGTTGCAAAGTTATCAAAAATATTTCCCAAAGATACAGAAGCTCCTCCCGGGGGAGTGGATGATATGACTAAATTGTCCTATTTGCATGAGCCTGGAGTCCTGGAGAACTTAAAAATTAGATATGAATTAAATGAAATATATACTTATACTGGAAACATATTGATTGCAATAAATCCATTCCAAAAACTACCTCATCTTTACGATTTACACATGATGCAACAATACAAAGGAGCGCCGTTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCCTATAGGGCAATGGTCAATGAAGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCCGGTAAAACTGAAACTACGAAAATGCTTATGCAATACCTTGCTTTCTTAGGTGGTAGGGCAGCCACTGAAGGACGAACGGTTGAACAACAAGTTCTTGAATCAAATCCAGTTTTGGAAGCATTTGGAAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAGTTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGCGCAGCTATTCGTACTTACCTTCTTGAGAGATCTCGTGTTTGCCAAGTTAATGATCCGGAACGCAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGACATCCTAAAACTTTTCATTACCTTAACCAGTCAAAATGCTTTGAACTGGCTGATATAAGTGATGCTCGTGAGTATCTTGCCACCAGGAGAGCCATGGATATTGTTGGAATAAGCGCAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGTAATATTGACTTTGCGAAAGGAAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAATCCAAATTCCACTTGAAAACAACTGCTGAGCTCCTCATGTGTGATGTAGATGCCTTGGAAGATGCATTATGTAAGAGGGTCATGGTCACCCCTGAGGAAATTATAAAACGGAGCCTTGATCCCCAAAGCGCAGCAGTCAGCAGAGATGGATTCGCAAAAACAATTTATTCTAGGCTTTTTGACTGGTTGGTGGACAAGATTAATAATTCAATTGGACAAGATGCCAATTCTAAATGTTTGATCGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTTACAAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACGAAGGAACAGATTGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTAGACCTTATTGAAAAGAAACCGGGAGGAATCGTTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCGACACATGAAACATTTTCGAACAAGCTTTATCAAACATTTAGCAAACACAAGCGCTTTATCAAACCAAAATTGTCTCGAACAGATTTCACTATTGCTCATTATGCTGGCGAGGTGCAGTACCAGTCTGATCAATTTTTAGATAAAAACAAGGATTATGTGGTTCCTGAACACCAAGATTTATTGAGTTCTTCCAAATGTACTTTTGTATCGGGCCTTTTTCCTCCACTTCCAGAAGAGACATCCAAATCTTCAAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTGCAACTACAGCAACTAATGGAGACATTAAACTCAACGGAGCCTCATTATGTTAGATGTGTGAAACCAAATAACCTCCTCAAGCCTGCAATTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGGATTAGTTGTGCTGGGTACCCAACTCGCCGTGCTTTCTTTGAGTTTATAAACCGATTTTCCCTCCTTGCCCCAGAGGCCTCGGAAGCAAACAATGATGAGAAGGCTGTTTGCCAAAAGATTCTAGAAAAGATGGAGCTTAAAGGATATCAGATTGGAAAAACAAAGATATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCTCGGAGAGCTCAAGTACTAAGTATAGCAGCAAAAACTATCCAGCGGCGTGTACGGACCCATCAGGCTCGTAGACATTATCTTGCATTACGAAAGAAAACCATATACGTGCAGTCTCTGTGGAGAGGAAGACTTGCATGCAAACTTTATCAGAACATGAGAAGGGAGGCTGCTGCTGTGAAAATTCAAAAGCACGTACGCAGACATGAATCAAGGAAAGGCTACATTAAACTCCATGCTTCAGTGCTTACTTTGCAAACAGCTTTGAGGGCAATCGCTGCTCGTAAAGAGTTTAGGTTTAAGAAACAGACTAAAGCTGCCACCATTATTCAGGCTCGCTGGCGGTGCCACAAGGCTTCCTCATATTATAAGAGGCTGAAGAGAGGTGCAATTGTGACGCAATGCCGATGGAGGGGGCGTGTAGCCAGAAAAGAGCTTAGGAACCTGAAAATGGCTTCAAGAGAAACTGGCGCACTTAAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAAGAACTCACATGGCGCCTCCAACTAGAAAAAAGTTTAAGGACTAATCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAATTCCCTGCAGGAACTGCAGAGCAAAGCTGATGAAACCAATGCCATGCTTGTAAAGGAGCGAGAGATTGCAAAGAAATCTATTGAAGAAGCACCTCCTGTTGTTAAAGAGACCCAGGTTATTGTTGAAGATACACAGAAGGTTGAATCACTAACAGCAGAAGTTGAGAAATTAAAGACGTCGCTTGAGTCAGAGAAAATGCAAGCTGTTGATTTTGAAAAGAAATATAAAGAAGCCCAAGCTTCTAGTGAAGAACGGTATAAAAAATTAGAAGACACAGAAAAGAAGGCTCGTCAGCTCCAAGAATCATTGACCAGGCTAGAAGAGAAGATTAGTAATTTAGAATCAGAGAACCAGGTTCTACGTCAACAAGCTGTTTCCATGGCACCTAATAAGTTCCTATCAGGGCGCTCCAGATCAATTATTCAGAGAGTTGACAGTGGACATATTGGAGGGGAAGCAAAGCCGCCACATTTGGATATGCATAGCTCATCAATGAACCAAAGGGAAAGGGAAAGGGAATCCGCTGAGGTGGAGGATAAACCACAGAAGTCACTGAATGAGAAACAACAGGAGAACCAAGAGTTGCTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAATAGACCAATTGCTGCCTGTATCATATACAAATGCCTCCTGCATTGGAGATCATTTGAAGTTGAGCGTACCAGCGTGTTTGATCGCATAATCCAAACTATAGGCCATGCAATTGAGACCCAGGAGAACAACGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACACTTCTCTTGTTGCTCCAGCGCACACTTAAGGCGAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGCCGTTCTTCCTCAGCAACTCTGTTTGGGAGGATGACACAAAGTTTCCGTGGAGCTCCAGCGGGAGTCAATATTTCCTTAATCAATGGTAGCATGAATGGGGGAGTAGATACATTAAGACAGGTTGAGGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCTTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTAGTTAAGGGGTCATCACGTTCAGTTGCAAACACTGAAGCGCAAAAGGCCCTGATTGCTCACTGGCAGGGAATAGTCAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATAACGTCCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCGTTCATCAATGTCCAACTCTTTAACAGTCTTCTCTTAAGACGGGAGTGTTGCTCATTTAGTAATGGAGAATATGTGAAAGCTGGTTTGGCTGAATTGGAACATTGGTGTTATAAGGCAACTGATGAGTATGCAGGTCCAGCCTGGGATGAGCTCAAACATATTAGGCAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGTTGGATGAAATAAGTCATGACCTGTGTCCAGTCCTCAGTATACAGCAGCTATATCGAATTAGCACCATGTATTGGGATGACAAGTACGGCACACATAGTGTGTCCCCTGATGTCATATCCAATATGCGAGTATTGATGACTGAAGATTCAAATAATGCAGTGAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTCTCTGTTGATGACATATCAAAGTCAAATGAACAGATAGATATATCTGATATAGAGCCCCCGCCATTAATTCGTGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCCCGGATTGA 4605 0.4132 MGTPVNIIVGSHVWIEDPDVSWIDGQVSKITGQDAEIEATNGKKVVAKLSKIFPKDTEAPPGGVDDMTKLSYLHEPGVLENLKIRYELNEIYTYTGNILIAINPFQKLPHLYDLHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCFELADISDAREYLATRRAMDIVGISAKEQEAIFRVVAAILHIGNIDFAKGKEVDSSVPKDDKSKFHLKTTAELLMCDVDALEDALCKRVMVTPEEIIKRSLDPQSAAVSRDGFAKTIYSRLFDWLVDKINNSIGQDANSKCLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSNKLYQTFSKHKRFIKPKLSRTDFTIAHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSSSKCTFVSGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYVRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEASEANNDEKAVCQKILEKMELKGYQIGKTKIFLRAGQMAELDARRAQVLSIAAKTIQRRVRTHQARRHYLALRKKTIYVQSLWRGRLACKLYQNMRREAAAVKIQKHVRRHESRKGYIKLHASVLTLQTALRAIAARKEFRFKKQTKAATIIQARWRCHKASSYYKRLKRGAIVTQCRWRGRVARKELRNLKMASRETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLQNSLQELQSKADETNAMLVKEREIAKKSIEEAPPVVKETQVIVEDTQKVESLTAEVEKLKTSLESEKMQAVDFEKKYKEAQASSEERYKKLEDTEKKARQLQESLTRLEEKISNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRVDSGHIGGEAKPPHLDMHSSSMNQRERERESAEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQENNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGVNISLINGSMNGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGPAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSNEQIDISDIEPPPLIRENSGFSFLLPRPD* 1535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0157 1534 Coils Coil 916 950 - -
Tpr6g0157 1534 CDD MYSc_Myo11 76 720 IPR036018 -
Tpr6g0157 1534 Pfam DIL domain 1353 1456 IPR002710 -
Tpr6g0157 1534 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 Gene3D - 667 733 - -
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Tpr6g0157 1534 SMART DIL_2 1352 1459 IPR002710 -
Tpr6g0157 1534 CDD MyosinXI_CBD 1115 1500 IPR037975 GO:0007015
Tpr6g0157 1534 MobiDBLite consensus disorder prediction 1091 1115 - -
Tpr6g0157 1534 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Tpr6g0157 1534 Gene3D Kinesin motor domain 65 662 IPR036961 -
Tpr6g0157 1534 PANTHER MYOSIN 6 1531 - -
Tpr6g0157 1534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Tpr6g0157 1534 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Tpr6g0157 1534 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 Gene3D - 252 310 - -
Tpr6g0157 1534 ProSiteProfiles Dilute domain profile. 1164 1477 IPR002710 -
Tpr6g0157 1534 PANTHER MYOSIN-9 6 1531 - -
Tpr6g0157 1534 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 MobiDBLite consensus disorder prediction 1076 1116 - -
Tpr6g0157 1534 Coils Coil 968 1051 - -
Tpr6g0157 1534 Gene3D - 735 785 - -
Tpr6g0157 1534 Gene3D - 833 882 - -
Tpr6g0157 1534 Gene3D - 786 832 - -
Tpr6g0157 1534 Coils Coil 877 911 - -
Tpr6g0157 1534 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Tpr6g0157 1534 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Tpr6g0157 1534 Pfam IQ calmodulin-binding motif 738 755 IPR000048 GO:0005515
Tpr6g0157 1534 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 757 779 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 805 827 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 830 852 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 853 875 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 734 756 IPR000048 GO:0005515
Tpr6g0157 1534 SMART iq_5 782 804 IPR000048 GO:0005515
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Tpr6g0157 1534 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Tpr6g0157 1534 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Tpr6g0157 1534 Gene3D - 439 623 - -
Tpr6g0157 1534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Tpr6g0157 1534 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr6g0157 1534 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0157 Tpr-Chr6 1321831 1334096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0157 1 1534 Myosins gene family AT1G54560 83.909 0.0 2705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0157 K10357 - gmx:100816792 2734.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0157 6 1321831 1334096 Tpr1g1566 1 14510643 14533529 PCT