Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0149 ATGAGGATTATGATAAAGGGAGGTGTTTGGAAAAACACCGAGGATGAAATTCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAATGGGCTCGTATATCTTCGCTTCTTGTTCGTAAATCTGCGAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAAACCGAATGGACTAGAGAAGAGGATGAGAAGTTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACAATTGCTCCCATTGTTGGTCGTACTCCTTCGCAGTGTCTTGAACGATATGAGAAACTTCTTGATGCTGCTTGTGTTAAGGATGATAATTATGAGCCTGGTGATGACCCTAGGAAATTGCGTCCGGGGGAGATTGACCCGAATCCTGAGTCAAAGCCTGCTCGACCTGATCCGGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCTGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAGAAAGCCAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCTAGGAGGCTTGCTTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGAATTGATGTAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCCTTTGAGAAGAGGCCTCCTCCTGGTTATTTTGATGTTGCCGATGAGGATAGGACGGTGGAGCAGCCAGCATTCCCTACTACTATTGAAGAACTTGAGGGAAAAAGAAGGATCGATGTTGAGGCGCAGCTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCCGAGAGGCAAGATGCCCCGGCTGCTATTCTGCATGCCAACAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCACCCCAGATTTCTGACCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGTAGCGAGGAACTCACTGAAGGCAGCAGTGCTACACGTGCTCTTCTCTCTAATTATCCACAGACACCCAACCAAGCAATGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTGGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACACCGTTAAGGGATGGTTTTTCTTTTGGCATGACTCCTAAGGGAACTCCTCTTAGGGACGAGCTACATATCAATGAGGATATGGAGATGCACGACAGTGCTAAACTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCAGCCAGTTCAAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAGGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCTGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTATCGAGCTTATTAGGAACTCGTTGATAAGAGCTGACGGGGACAGGAGTTCATTTGTTCCACCAACCAATATTGAGCAAGCCGATGAGATGATAAGAAGGGAGCTTCTAACCTTACTGGAGCATGACAATGCCAAATATCCACTTGAGGAGATAGCAAATAAGGAGAAAAAGAAAGGATCCAAACGAGCGGCAAATGGACCTGCTGTCCCTGTCATAGAAGATTTTCAGGAGGACGAGATGAAAGAGGCTGATAAGTTGATAAAAGATGAAGCCGAGCATCTTCGTGTGGCAATGGGGCATGAAAATGATTCCCTTGATGAATTTGTTGAAGCACATACCACTTGCATTAATGATTTAATGTACTTTGTCACCCGTAATGCATATGGTCTATCAAGTGTTGCGGGAAACACGGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGTAAGGAGAAATTGATACGACTTGAGAAGAAGGTTACTTTACTCACACATGGGTATGAGATGAGATCAAAAAACGGTATTTGGCCGCAGATCGAGGCCACTTTCAAGCAGATGGACATGGCTGCAACAGAATTCGAGTGTTTTCAAGGTTTGAAAAAACAGGAGCAGTTAGCAGCAAAGCATAGGATAAACAATCTTTGGTCTGAAGTTCAGAAGCAAAAGGAACTTGAGAGAACTTTACAGAAGAAATACGGAGATCTTATGGTAGAGCTGGAAAGGACACAAAACATAATGGAGCAGTTCAGGGTAGAAGCACAACAGAAGGAAGAAATTGAAGCCAAGAACCATGCAATAGAAGAGGTAGAAGCACAACAGCAAGAAGAAACCGAAGCAAAGAATCATGTCCTTGAGATTTCTGAAGCCACGGCTGATGAAATTAATGTGCAGGGTACAGAAAATTGTGAAGCAGTACCCATCTCAGCTGACCCGGAAATAGCCACTGTGCAAGATCAGGCTACTTCTAGCTCCAAAGTTGATATGGATGTGGATTCCTCCTCTGAAGCACAAGCTACACACATCACTGGTGTTACATTGCCAGATGCACCTGCTGCAGAGGATGAAAATTCAAAAGCTGTAGAAGGCGAAAACATTGAAAGCGTTATTGAAAATAGTGAGACCGCAGTAGATACAAGTGCTGCATTGGAAATAAAAAGTAACGAGGAAAATGGTGAGGGTCAAGATGTTGCCAATCCAGATGAGGTTATGGAAGCTGCAAACAAACCTGATAACATAAAAGAAGCTACCCTGCTTGATGACATGCAAGTTGATGATGGTAAACGAGATGATGAGGCAAATTAG 2973 0.4437 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDRTVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEELTEGSSATRALLSNYPQTPNQAMTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPLRDGFSFGMTPKGTPLRDELHINEDMEMHDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPVQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPPASIELIRNSLIRADGDRSSFVPPTNIEQADEMIRRELLTLLEHDNAKYPLEEIANKEKKKGSKRAANGPAVPVIEDFQEDEMKEADKLIKDEAEHLRVAMGHENDSLDEFVEAHTTCINDLMYFVTRNAYGLSSVAGNTEKLAALQNEFENVRSKLDDGKEKLIRLEKKVTLLTHGYEMRSKNGIWPQIEATFKQMDMAATEFECFQGLKKQEQLAAKHRINNLWSEVQKQKELERTLQKKYGDLMVELERTQNIMEQFRVEAQQKEEIEAKNHAIEEVEAQQQEETEAKNHVLEISEATADEINVQGTENCEAVPISADPEIATVQDQATSSSKVDMDVDSSSEAQATHITGVTLPDAPAAEDENSKAVEGENIESVIENSETAVDTSAALEIKSNEENGEGQDVANPDEVMEAANKPDNIKEATLLDDMQVDDGKRDDEAN* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0149 990 Gene3D - 59 114 - -
Tpr6g0149 990 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 798 - -
Tpr6g0149 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Tpr6g0149 990 Coils Coil 682 716 - -
Tpr6g0149 990 Coils Coil 796 836 - -
Tpr6g0149 990 Coils Coil 167 187 - -
Tpr6g0149 990 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Tpr6g0149 990 SMART sant 6 55 IPR001005 -
Tpr6g0149 990 SMART sant 58 105 IPR001005 -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 338 358 - -
Tpr6g0149 990 Pfam Myb-like DNA-binding domain 10 70 - -
Tpr6g0149 990 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 498 528 - -
Tpr6g0149 990 Gene3D - 5 58 - -
Tpr6g0149 990 CDD SANT 10 53 IPR001005 -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 510 528 - -
Tpr6g0149 990 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Tpr6g0149 990 CDD SANT_CDC5_II 55 106 - -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 380 422 - -
Tpr6g0149 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 875 898 - -
Tpr6g0149 990 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 875 933 - -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 970 990 - -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 338 355 - -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 964 990 - -
Tpr6g0149 990 MobiDBLite consensus disorder prediction 110 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0149 Tpr-Chr6 1278523 1287697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0149 1 833 MYB-Related Transcription Factor Family AT1G09770 74.761 0.0 1226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr6g0149 Myb_Cef 4.6e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0149 K12860 - gmx:100790369 1466.44