Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0135 ATGGCTACTTACCATGTTGGTCTCCATGAAATTGGAATCATTTTCTTGCTCCAAATGATTGCTATTTCTGTAAAGCCACTTTCATTCAATTACCAACAAGGCTTTAAATATGATAATGTAAAACTAGAAGGAGATGCTTCTTTGATGTATTCATACATCCAACTTACTTCAACCTCAAGGTACCAAAGTAATGCTTACAGTGTTGGCCGAGTCACGTCTTTCGAGCCATTACAACTATGGGACAAGGCCTCAAGAAAACTCACTGATTTCACTACTCAATTTTCCTTTGTAATTTACTCAAATGAAACTGATTTTGGAGATGGATTGACATTTTTCTTTGCAGATCCAGAACTTCCACTTTATTACCATATAAAACAAGGTGGTGGTCTTGGTCTTGTGGATGATTTCCACATAGTTCATTCTAGATATTCATTTCTAGCGGTGGAGTTTGACACTTACCATAATTCTTGGGATCCATCAGGTACTCATGTAGGTATAAATTTCAACTCTATGATATCAAATATAACTAAACCATGGTTCATTGATATTATGAGTAAGACAGCTCATTATGATTGTAAAATTGAGTACAATTCAAGTACTCATAATTTGAATGTTTCTTTTACTGGAAACATAACATATGGTGACATTTTTGAGCCTTCAAAAAGTTACATCTCATACAATGTTGATTTGAGAGATTACTTGCCTGAGAAGGTTATTGTTGGTTTCTCAGCTGCTACAGGATATATGTTTGAGATGAATAAATTAAAGTCATGGTCATTCAATTCAAGTTTAAATATTCATGATGAGAATTCTAGTCCAATTCCAACAAATCCTAGTCCTTCGCCGATTCCAAATGTTAAAATTAGTCCGAAAATAGTTAGCAGAAGAGGTACTAGTAGTATATGGGTAGAGCTAGGAGTCGGTGTAGCTATTGCAGCAAGTTTCCTTATTTTAGGAGGGGTTTGTAATTTAATTTGGAAAAGGACTAAAGGGAAAAAAGAAGATTCAATTTTTGACATGAAAATGGATGATGAATTCCAAAATGGCACCGGACCTAAAAAGTTTTGCTATCATAAATTGGCGAGCGCAACAAATAACTTTGCAGAAAAACAAAAGATCGGACAAGGTGGTTTTGGCGGTGTTTATAAAGGCTATTTGAAAGACATAGATTCCAATGTTGCTATAAAACGGATATCAAGAGAGTCGAAACAAGGGATTAAGGAATATGCAACTGAAGTGAAGATCATTAGTCAACTTAGACATAGGAATTTAGTTCAACTAATTGGTTGGTGTCACAAGAAAAAAGACTTTCTCCTTATATATGAATTCATGCAAAATGGTAGTTTAGATTCTCACCTATATCGTGGAAAAAGCGTATTGACATGGCAAATGCGGTACAACATTGCCATAGACTTGGCTCTAGCACTTCTATACCTTCATGAAGAATGGGAACAATGTGTGCTTCATAGAGACATAAAATCCAGCAACATTATGTTGGACGACAATTTCAATGCCAAGCTTGGTGATTTTGGATTGGCTAGGCTTGTGGATTACGAGAAAGGATCGCAATCACAAACCACAGTTATAGCTGGAACCATGGGATACATAGCTCCTGAATATTTCACAACAGGGAAAGCTACAAAAGAATCAGATATATACAGTTTTGGTATTGTTTCATTGGAATTAGCCAGTGGAAGAAAACCAGTTGATCTTAATGCTAAGGAGGATCAAATGGCTATATTTGATTGGGTTTGGGAGCTTTATAGATTAGGAAGGTTGCTTGAAGTAGTAGACACAAAACTCGAGGGTATATTTGACGAAGAACAAATGGAACGTTTGGTGGTTATTGGTCTTTGGTGTGCCAATCCAAATTATTCATTTAGGCCATCTGTAAGACAAGTTATTCAGCTGCTTAAATTTGAAGCTCCTTTACCAATTCTCTCACCTCCAACAAAGAGTACAATTAGTCTTGTTTCTTCTGCCTCTCCGTAG 1992 0.3599 MATYHVGLHEIGIIFLLQMIAISVKPLSFNYQQGFKYDNVKLEGDASLMYSYIQLTSTSRYQSNAYSVGRVTSFEPLQLWDKASRKLTDFTTQFSFVIYSNETDFGDGLTFFFADPELPLYYHIKQGGGLGLVDDFHIVHSRYSFLAVEFDTYHNSWDPSGTHVGINFNSMISNITKPWFIDIMSKTAHYDCKIEYNSSTHNLNVSFTGNITYGDIFEPSKSYISYNVDLRDYLPEKVIVGFSAATGYMFEMNKLKSWSFNSSLNIHDENSSPIPTNPSPSPIPNVKISPKIVSRRGTSSIWVELGVGVAIAASFLILGGVCNLIWKRTKGKKEDSIFDMKMDDEFQNGTGPKKFCYHKLASATNNFAEKQKIGQGGFGGVYKGYLKDIDSNVAIKRISRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHKKKDFLLIYEFMQNGSLDSHLYRGKSVLTWQMRYNIAIDLALALLYLHEEWEQCVLHRDIKSSNIMLDDNFNAKLGDFGLARLVDYEKGSQSQTTVIAGTMGYIAPEYFTTGKATKESDIYSFGIVSLELASGRKPVDLNAKEDQMAIFDWVWELYRLGRLLEVVDTKLEGIFDEEQMERLVVIGLWCANPNYSFRPSVRQVIQLLKFEAPLPILSPPTKSTISLVSSASP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0135 663 PANTHER LECTIN RECEPTOR KINASE 19 652 - -
Tpr6g0135 663 PANTHER - 19 652 - -
Tpr6g0135 663 Gene3D Phosphorylase Kinase; domain 1 352 443 - -
Tpr6g0135 663 Gene3D Transferase(Phosphotransferase) domain 1 444 648 - -
Tpr6g0135 663 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Tpr6g0135 663 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0135 663 Pfam Legume lectin domain 27 270 IPR001220 GO:0030246
Tpr6g0135 663 Gene3D - 25 274 - -
Tpr6g0135 663 Pfam Protein kinase domain 368 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0135 663 CDD STKc_IRAK 373 639 - -
Tpr6g0135 663 CDD lectin_legume_LecRK_Arcelin_ConA 27 264 IPR001220 GO:0030246
Tpr6g0135 663 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Tpr6g0135 663 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Tpr6g0135 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 280 IPR013320 -
Tpr6g0135 663 SUPERFAMILY Protein kinase-like (PK-like) 351 649 IPR011009 -
Tpr6g0135 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Tpr6g0135 663 SMART serkin_6 367 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0135 Tpr-Chr6 1165477 1167468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0135 13 656 Receptor kinase-like Gene Family AT5G10530 43.009 1.73e-165 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g0135 Pkinase 5.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0135 - - gmx:100814713 912.909