Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0131 ATGGAAAAAGGGTTTTCTTCTTCTTTGTTGTTATTGCTATTATTGATTACTTCTCTTGTGATATCTGTTTATGGTGAATATGCACATTGCAACTGTGATGATGATGATGATGATGGTGATTGGATTTGGAGTATTCAAAGTATTTTGGTTTGTCAAAAAGTCAGTGATTTTTTCATTGCTATAGCATATTTTTCCATACCCCTTGAGCTTCTTTACTTTGTTAGTTACTCCAATGTTCCATTTAAATTGGTATTCCTTCAATTTGTTGCTTTCATTGTTCTATGTGGTTTGACCCATTTACTCAATGCCTATACTTACTATGGACCTCATTCCTTTCATTTGTTTCTATCTCTCACTGTTGCTAAATTCTTCACTGCCCTTGTTTCATGTGCCACTGCAATTACTTTTCCTACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTGTTTTTGAGGCAGAATGTGTTGGAATTAGGGCAAGAGGTTGGGATTATGAAGAAACAGAAAGAGGCTAGTTGGCATGTTAGGATGTTGACGCGTGAGATTAGGAAGTCGTTAGATAAGCATACCATTTTGTATACTACCCTTGTTGAGCTTTCAAAGGCGTTGGAGTTGCATAATTGTGCGGTTTGGATGCCTGATGAGGACAGACGGGTGATGCATTTGACTCATGAGTTGAAACCGAATCCGGCAAAGAGTTTTCATAGTTCTATTTCTCTAAATGATTTGGATGTGTTAGAGGTAAGAAAGAGCAAGGGGGTGTCGATTTTGAGGCCTGATTCTGCACTTGGATCTGCGAGTAGTGGTGGATCTGAGGACTCGGGTGCTGTAGCAGCCATTCGTATGCCGATACTTCATGTTTCGAATTTCAAGGGAGGGACACCGGAGTTTGTTGAGACGTCTTATGCTATACTGGTTTTGGTTCTTCCAAAATCTAACTCAAGGGCTTGGACCTACCATGAGATGGAGATAGTGGAAGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAACTTGCGGAGCAAAACCGGGCGTTGCAACAGGCACAAAAATATGCAATGATGGCCAGCCAAGCAAGGAGCTCATTTGAGAAAGTGATGAGCCATGGAATGAGGAGACCTATGCATTCAATCCTGGGCTTACTTTCAATGTTTCAAGAGGATAGTATAAGATCTGAACAGAAGATTGTTGTTGACACAATGTTGAAAGTTAGCAATTCGCTCTCGCGTTTGATAAATGATGTTATGGAGATTTCGGCCAACGATAAAGGTACTTTCCAGTTAGAGTCGAAACATTTCCATCTACATTCCATGATGAGGGAAGCTTCTTGTATTGCCAAGTGTTTGTGTGTGTATAAAGGTTTTGGTCTTGAAATTGATGTGCAAAGATCTTTGCCTGATATGGTAATAGGTGATGAGGCAAGGTCTTTTCAATTAATTTTGCATATGATTGGCTATTTATTGAACTTATATGATAGAGGTACTCTCATTTTTCGAGTTTCTCTTGAAAGTGATTCTGGTAAGGATGATAGAAGTTCTGGAATATGGAGATCAAACATGCAAAATGATGATGTAAATATAAAATTTAATTTCCAGATAGCCGGTACTAGTTCCCATTCAGATGAATTAATTTTGACTAGAAGTAGTGCTAGTATGATGCACCACAACGATGAACCTAAGGAGGGCTTGAGCTTCAGCATTTGCAAAACGCTTGTGCAGATGATGCAAGGTAATATCTGGGTATCACCAAACTCTCTGGGTTTGGCACAAGGAATGACACTTCTTCTCAAGTTTCAATTAGGATCATCGCGTGGAAGATTTGTTCTAGCTCATAAAGAATTTTCAAACCAACAGTTTAGAGGACTTAAGGTTATTTTAGCCGACGATGATAATGTAAACATGACTGTAACAAAGAAGCTACTCGAGAAGCTAGGTTGTCAAGTAACTGCTGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCCTCCAGTGTATCATTTAAAGTCATCCTATTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCCTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACACATAAAGGAAAGATGCCTTCAGGTGGGAATGAATGGATTGATTCGGAAACCTATCCTCCTTCACGAGTTAGCTGATGAACTTAAAACAGTCCTGCTACGTGCAGGTGAAAAATTGATGAAAGCTGGGAGGGTAGTAATGGAGCTTTTTGCTGATGCTACCCCGAAAACAGCTGAAAACTTCAGAGTTCTCTGCACTGGTGAGAAGGGAATTGGACAGTGTGGTAAACCTTTACACTTCAAAGGTTCTGGTTTTCATCGTATTATTCCAGAATTTATGTGTCAGGGAGGAGATTTTACCAGAGGGAATGGTACTGGAGGAGAGTCTATTTACGGGGCTAAATTTGCCGATGAAAATTTTAAGTTGAAGCATACCGGACCTGGTATTCTTTCCATGGCAAATTCTGGACCTAATACAAATGGTTCCCAATTTTTTATATGTACTACCAAGACTCCATGGCTTGATGGGAAACATGTTGTATTTGGGAAAGTAGTTGATGGATACAGTGTAGTTCAGGAAATGGAGAAGTCCGCAAAAGGATCAAATGCTGGAGGAATTTCCATCTACTGGGGTCAAAATGGAAATGAAGGCACATTAGCTGAAACTTGTGGCACAAGTAACTATGAATATGTGAACATTGCTTTTCTCTACACTTTTGGCAATGGTAGAGTCCCAAGAATAGACCTTGCTGGTCATTGTGATGCATATAGTAATGAATGTACCAAACTAAGCGCCGACATAAAGTCATGTCAAGCCAAAGGAATTAAAGTTATCCTTTCAATTGGAGGTGGTGCTGGAAGCTACTCACTTGCATCTTCAGAGGATGCTAGAATCGTCGCCACTTACCTTTGGAACAATTTCTTGGGTGGACACTCATCTACACGTCCACTTGGCGACGCTATTTTGGATGGAATTGATTTTGACATTGAAGGAGGAACAAATCAACATTGGGATGAACTTGCAAAGTATCTTTCAGGGTATAGCAAAAAGGGAAAGAAGGTTTATTTAACAGCCGCTCCTCAATGTCCTTTTCCTGATGCTATGCTCGGAGAAGCTCTTAAGACAGGTCTTTTCGACTATGTTTGGGTTCAATTTTACAACAATCCGCCTTGTCAATACTCTTCTGCAGATATTGGTAATCTTGAAAATGCATGGAAAGAATGGATTAATGAAATTCCAGCAACAAAGATTTTCTTAGGATTACCAGCATCTCCACAGGCTGCAGGAAGTGGTTTTGTTTCTGTTGATGACTTGACATCAAAAGTACTTCCTATCATTAAGGGTAGCTCAAAATATGGAGGTGTTATGTTATGGTCCAAGTACTATGATGATCAAACTGGATATAGTTCTTCCATCAAAAGTGATATCTAG 3543 0.3991 MEKGFSSSLLLLLLLITSLVISVYGEYAHCNCDDDDDDGDWIWSIQSILVCQKVSDFFIAIAYFSIPLELLYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFHLFLSLTVAKFFTALVSCATAITFPTLIPLLLKIKVRELFLRQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALELHNCAVWMPDEDRRVMHLTHELKPNPAKSFHSSISLNDLDVLEVRKSKGVSILRPDSALGSASSGGSEDSGAVAAIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRAWTYHEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQKYAMMASQARSSFEKVMSHGMRRPMHSILGLLSMFQEDSIRSEQKIVVDTMLKVSNSLSRLINDVMEISANDKGTFQLESKHFHLHSMMREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDEARSFQLILHMIGYLLNLYDRGTLIFRVSLESDSGKDDRSSGIWRSNMQNDDVNIKFNFQIAGTSSHSDELILTRSSASMMHHNDEPKEGLSFSICKTLVQMMQGNIWVSPNSLGLAQGMTLLLKFQLGSSRGRFVLAHKEFSNQQFRGLKVILADDDNVNMTVTKKLLEKLGCQVTAVSSGFDCLAAITASSVSFKVILLDLHMPEMDGFEVARKIRKFQSRNWPLIIALTASAEEHIKERCLQVGMNGLIRKPILLHELADELKTVLLRAGEKLMKAGRVVMELFADATPKTAENFRVLCTGEKGIGQCGKPLHFKGSGFHRIIPEFMCQGGDFTRGNGTGGESIYGAKFADENFKLKHTGPGILSMANSGPNTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVQEMEKSAKGSNAGGISIYWGQNGNEGTLAETCGTSNYEYVNIAFLYTFGNGRVPRIDLAGHCDAYSNECTKLSADIKSCQAKGIKVILSIGGGAGSYSLASSEDARIVATYLWNNFLGGHSSTRPLGDAILDGIDFDIEGGTNQHWDELAKYLSGYSKKGKKVYLTAAPQCPFPDAMLGEALKTGLFDYVWVQFYNNPPCQYSSADIGNLENAWKEWINEIPATKIFLGLPASPQAAGSGFVSVDDLTSKVLPIIKGSSKYGGVMLWSKYYDDQTGYSSSIKSDI* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0131 1180 CDD HATPase_ETR2_ERS2-EIN4-like 480 611 - -
Tpr6g0131 1180 Gene3D - 339 437 - -
Tpr6g0131 1180 SMART REC_2 637 752 IPR001789 GO:0000160
Tpr6g0131 1180 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 773 788 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 809 821 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 852 867 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 867 879 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 880 895 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 Gene3D - 623 753 - -
Tpr6g0131 1180 ProSiteProfiles Histidine kinase domain profile. 381 617 IPR005467 -
Tpr6g0131 1180 CDD cyclophilin_ABH_like 765 906 - -
Tpr6g0131 1180 Pfam Glycosyl hydrolases family 18 911 1167 IPR001223 GO:0005975
Tpr6g0131 1180 PANTHER ETHYLENE RECEPTOR 9 756 - -
Tpr6g0131 1180 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 359 439 IPR036097 GO:0000155|GO:0007165
Tpr6g0131 1180 CDD HisKA 372 434 IPR003661 GO:0000155|GO:0007165
Tpr6g0131 1180 Pfam His Kinase A (phospho-acceptor) domain 376 438 IPR003661 GO:0000155|GO:0007165
Tpr6g0131 1180 SUPERFAMILY CheY-like 633 756 IPR011006 -
Tpr6g0131 1180 PANTHER TWO-COMPONENT HISTIDINE KINASE 9 756 - -
Tpr6g0131 1180 Gene3D - 438 618 IPR036890 -
Tpr6g0131 1180 Pfam GAF domain 191 338 IPR003018 GO:0005515
Tpr6g0131 1180 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 766 903 IPR002130 GO:0000413|GO:0003755
Tpr6g0131 1180 SUPERFAMILY GAF domain-like 192 341 - -
Tpr6g0131 1180 SMART HisKA_10 374 439 IPR003661 GO:0000155|GO:0007165
Tpr6g0131 1180 Pfam Response regulator receiver domain 639 752 IPR001789 GO:0000160
Tpr6g0131 1180 CDD GH18_hevamine_XipI_class_III 908 1178 IPR045321 -
Tpr6g0131 1180 Gene3D Glycosidases 911 1180 - -
Tpr6g0131 1180 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 1026 1034 IPR001579 GO:0004553|GO:0005975
Tpr6g0131 1180 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 908 1180 IPR001223 GO:0005975
Tpr6g0131 1180 CDD REC_ETR-like 637 752 - -
Tpr6g0131 1180 Gene3D - 173 338 IPR029016 -
Tpr6g0131 1180 SMART gaf_1 189 348 IPR003018 GO:0005515
Tpr6g0131 1180 Gene3D - 754 910 IPR029000 -
Tpr6g0131 1180 SUPERFAMILY Cyclophilin-like 765 904 IPR029000 -
Tpr6g0131 1180 SUPERFAMILY (Trans)glycosidases 905 1177 IPR017853 -
Tpr6g0131 1180 ProSiteProfiles Response regulatory domain profile. 638 756 IPR001789 GO:0000160
Tpr6g0131 1180 Coils Coil 344 364 - -
Tpr6g0131 1180 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 804 821 IPR020892 GO:0003755|GO:0006457
Tpr6g0131 1180 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 766 929 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0131 Tpr-Chr6 1120840 1130340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0131 25 761 Miscellaneous Gene Families AT3G04580 61.457 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr6g0131 Glyco_hydro_18 3.3e-31 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0131 K14509 - gmx:100805023 1202.96