Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0130 ATGGAACACAGTGACAATCAGTTAAGCTCTTTCTTCCACCACCACAACCACCACCAACAAGGAAATTCCACCACCGCTACAACCACCGCAATTCCGACGAACGGACTTTTATCGAACACAGATGGGTCCCACATACTGTATCCTCATTCAGTGGCTTCTTCTGCTGTATCGTCTCAGCTTGAACCAGCTAAGAGAAAGAGAGGAAGACCTAGAAAATATGGAACACCTGAACAAGCCCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCCCCTACTCCACCTTCCGATAACAACAACAATAGCAACAAGAACACCACTCACTCTTTCTCTACCTCTCCTTCTTTCTCTTCTAAGAAATCTCATTCTCTCTCTCTAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGTCAGAAAATTATGCAATTTATGCAACAAAATAGGGGTGAGGTATGCATTCTATCTGCATCCGGTTCCATCTCTAATGCCTCTCTTCGTCAACCAGCATCTTCAGGAGGCAACATTACATATGAGGGTCGGTTTGATATTATTTCGCTTACCGGTTCCTATGTGCGTAATGAAACTGGAGGGCGAAATGGTGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGCGGGCCCCTTAAAGCTGCCAGTCCAGTTCAGGTCATTGTTGGTACATTTCTTATCGACAACAAGAAGGATACTAGTGCTGGTGGAAAAGGTGATACCTCTGCCGGTAAGTTGCCATCACCAGTTGGAGAATCACCATCGAATTTAGGTTACCGCCAAACAGTTGACAGTTCCAGTGGGAATCCAATGCGGGGAAATGATGAACATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCACGTGACACCTCCCAGGTCCACAGACTGGGGGAGTCATCCTGATTCAAGGCATGCTGGTTATGACCTCTCAGGAAGAACAGGTCATGGGTCACACCAGTCTCCTGAGAATGGAGGCTATGACCAAATTCCTGATTGA 1074 0.4628 MEHSDNQLSSFFHHHNHHQQGNSTTATTTAIPTNGLLSNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTPPSDNNNNSNKNTTHSFSTSPSFSSKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQNRGEVCILSASGSISNASLRQPASSGGNITYEGRFDIISLTGSYVRNETGGRNGGLSVCLSNSDGQIIGGGVGGPLKAASPVQVIVGTFLIDNKKDTSAGGKGDTSAGKLPSPVGESPSNLGYRQTVDSSSGNPMRGNDEHQAMGGSHFMIQQLGLHVTPPRSTDWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0130 357 MobiDBLite consensus disorder prediction 52 116 - -
Tpr6g0130 357 Gene3D - 134 258 - -
Tpr6g0130 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 245 IPR005175 -
Tpr6g0130 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 349 IPR039605 GO:0003680
Tpr6g0130 357 MobiDBLite consensus disorder prediction 318 357 - -
Tpr6g0130 357 MobiDBLite consensus disorder prediction 81 116 - -
Tpr6g0130 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 246 - -
Tpr6g0130 357 MobiDBLite consensus disorder prediction 274 289 - -
Tpr6g0130 357 MobiDBLite consensus disorder prediction 253 289 - -
Tpr6g0130 357 ProSiteProfiles PPC domain profile profile. 129 269 IPR005175 -
Tpr6g0130 357 CDD DUF296 136 245 IPR005175 -
Tpr6g0130 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0130 Tpr-Chr6 1113818 1118123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0130 23 357 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 50.546 5.40e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0130 - - gmx:100809675 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0130 6 1113818 1118123 Tpr6g0130 6 1113818 1118123 ECH