LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g0114	ATGTTAGAAAAGAATAATGATGGGTTTGTGAGAGCTGATCTAATTGATCTTAAGAGCATAGATGAACAACTTGAGAAACATCTCAATAAAGCATCACCGACTATAGATGATGATCATCATAAGATGAAGCAGAGAGAGGAAGATATTAATGGTGGTGATGATGTTTTGAACAAGCAGAGACAGGAGTGGGAAATTGACCCTTCTAACCTCATCATCAAGACTGTCATAGCTCGTGGCACTTTTGGTACTGTTCACCGTGGTATCTATGATGGTCAAGATGTTGCTGTTAAAATGCTGGACTGGGGTGAAGAAGGGCACCGGACAGAAGCTGAAATTGCTGCACTCAGGTCGGCATTCACGCAAGAAGTTGTTGTTTGGCATAAACTTGATCATCCTAATGTCACTAAGTTTATAGGGGCAACAATGGGATCTTCGGAATTACAGATACAAACTGAGAATGGTCTAATTAGCCTACCAAGCAATATCTGCTGTGTGGTTGTAGAGTATCTTCCTGGAGGTGCACTGAAATCTTTCTTAATCAAAAATAGGAGAAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATATGGCGAGAGGGCTGAATTATCTTCACTCTCAAAAGATTGTCCACAGAGATGTAAAGACAGAGAATATGCTGTTAGATAAGACGCGTGAAGTTAAAATTGCTGATTTTGGTGTTGCTCGTATTGAAGCCTCGAATCCAAATGACATGACCGGGGAGACTGGTACACTCGGTTACATGGCTCCTGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTATATAGTTTTGGCATATGTTTATGGGAAATATATTGTTGCGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATGTTAGACCAGAAATACCAAGATGTTGTCCAAGTTCTCTGGCAAATGTAATGAAGAAATGCTGGGATGCAAATCCCGATAAGCGACCTGAAATGGATGATGTAGTTGCCATGCTGGAAGCTATTGACACATCCAAAGGTGGAGGTATAATCCCTCCTGATCAGCAACAAGGTTGTCTCTGCCTCCGTAAACGCCGCGGGCCTTGA	1122	0.4198	MLEKNNDGFVRADLIDLKSIDEQLEKHLNKASPTIDDDHHKMKQREEDINGGDDVLNKQRQEWEIDPSNLIIKTVIARGTFGTVHRGIYDGQDVAVKMLDWGEEGHRTEAEIAALRSAFTQEVVVWHKLDHPNVTKFIGATMGSSELQIQTENGLISLPSNICCVVVEYLPGGALKSFLIKNRRRKLAFKVVIQLALDMARGLNYLHSQKIVHRDVKTENMLLDKTREVKIADFGVARIEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNVRPEIPRCCPSSLANVMKKCWDANPDKRPEMDDVVAMLEAIDTSKGGGIIPPDQQQGCLCLRKRRGP*	374

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g0114	373	Pfam	Protein tyrosine and serine/threonine kinase	72	344	IPR001245	GO:0004672\|GO:0006468
	Tpr6g0114	373	ProSiteProfiles	Protein kinase domain profile.	70	347	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g0114	373	CDD	STKc_MAP3K-like	76	344	-	-
	Tpr6g0114	373	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	4	367	-	-
	Tpr6g0114	373	PRINTS	Tyrosine kinase catalytic domain signature	167	180	IPR001245	GO:0004672\|GO:0006468
	Tpr6g0114	373	PRINTS	Tyrosine kinase catalytic domain signature	205	223	IPR001245	GO:0004672\|GO:0006468
	Tpr6g0114	373	PRINTS	Tyrosine kinase catalytic domain signature	271	293	IPR001245	GO:0004672\|GO:0006468
	Tpr6g0114	373	PRINTS	Tyrosine kinase catalytic domain signature	315	337	IPR001245	GO:0004672\|GO:0006468
	Tpr6g0114	373	PIRSF	ILK	18	353	-	-
	Tpr6g0114	373	SMART	serkin_6	70	347	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g0114	373	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	211	223	IPR008271	GO:0004672\|GO:0006468
	Tpr6g0114	373	SUPERFAMILY	Protein kinase-like (PK-like)	57	344	IPR011009	-
	Tpr6g0114	373	Gene3D	Phosphorylase Kinase; domain 1	58	153	-	-
	Tpr6g0114	373	Gene3D	Transferase(Phosphotransferase) domain 1	170	357	-	-
	Tpr6g0114	373	PANTHER	-	4	367	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g0114	Tpr-Chr6	905188	907814	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g0114	7	373	MAP Kinase Kinase Kinase	AT3G22750	64.960	0.0	523

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Tpr6g0114		PK_Tyr_Ser-Thr	3.1e-63	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g0114	-		-	gmx:100791455	652.514