Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0098 ATGGGAACCAGTGAGGAAGAGAAATCTACCAAGACTGAAAAGCCTTCTTCACCTTTAACAGCGGATCAGACCAATAACCAGGCAAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTACAATTCACCTGTGCCTTCTGGTCACACTCCTCACCCATATATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGACACATCCACATAGTCAAGGAATTTCATCTTCACCTGTTACTGGAACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGGAAATACCGATCAGGGTTTGATGAAGAAATTGAAAGGGTTCGATGGCCTTGCAATGTCAATAGGCAATGGCCATGCTGAGAGTGCAGAGCCTGGAGCTGAAAGCAAGCTGTCACAGAGCGTGGATACTGACGGTTCAAGTGATGGAAGTGACAGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGATGGAGAAGGCAAAACTCATACACAAGGTAGTCAAGCTTCCAAAGAAATTGCAACTTCTAATAAGATGATGGCAGTTGGACCGGTAGTTTCTTCAGCGATGACCACTGCACTGGAGCTGAAAAATCCTTCCAGTGTTAAATCTAAAACAAATCCAACAAGTGCCCCACAACCTTCTGCTGTGTTGCCTCCAGAGGCTTGGATGCAGAATGAGCGTGAACTGAAACGTGAGAGGAGGAAACAATCAAATCGTGAATCTGCTAGGAGGTCAAGACTAAGAAAGCAGGCTGAGGCCGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAGTGCGTCACTTAAATCAGAAATAAATCGACTTGCTGAGAGTTCTGAAAAACTGAGGATGGAAAATGCTGCATTGAAGGAAAAATTCAAAATTGCTCAACTAGGACAACCAAAAGAGATTATTTTAAGCAGCATTGACAGCCAGAGGATTACACCTGTAAGTACAGAAAACTTATTATCAAGAGTTAATAACAATTCAGGTTCTAATGATAGAGCCATGGAGGATGAGAATAGTTATTGTGACAACAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTAGATACAAGTCCTAGAGCTGATGCTGTAGCTGCTGGTTGA 1254 0.4426 MGTSEEEKSTKTEKPSSPLTADQTNNQANIHVYPDWAAMQAYYGPRVAMPPYYNSPVPSGHTPHPYMWGPPQPMMPPYGHPYAAMYPHGGVYTHPAVPIGTHPHSQGISSSPVTGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESKLSQSVDTDGSSDGSDSNTSGANQTRRKRSREGTPTTDDGEGKTHTQGSQASKEIATSNKMMAVGPVVSSAMTTALELKNPSSVKSKTNPTSAPQPSAVLPPEAWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLKSEINRLAESSEKLRMENAALKEKFKIAQLGQPKEIILSSIDSQRITPVSTENLLSRVNNNSGSNDRAMEDENSYCDNKPNSGAKLHQLLDTSPRADAVAAG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0098 417 MobiDBLite consensus disorder prediction 269 300 - -
Tpr6g0098 417 Pfam bZIP transcription factor 271 333 IPR004827 GO:0003700|GO:0006355
Tpr6g0098 417 SUPERFAMILY Leucine zipper domain 274 330 IPR046347 GO:0003700|GO:0006355
Tpr6g0098 417 MobiDBLite consensus disorder prediction 160 186 - -
Tpr6g0098 417 Coils Coil 284 339 - -
Tpr6g0098 417 SMART brlzneu 271 335 IPR004827 GO:0003700|GO:0006355
Tpr6g0098 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 417 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr6g0098 417 Pfam Disordered region downstream of MFMR 131 252 - -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 1 28 - -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 187 201 - -
Tpr6g0098 417 CDD bZIP_plant_GBF1 276 324 IPR045314 GO:0003700|GO:0006355
Tpr6g0098 417 PANTHER G-BOX-BINDING FACTOR 3 1 417 - -
Tpr6g0098 417 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 104 131 - -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 241 256 - -
Tpr6g0098 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 273 336 IPR004827 GO:0003700|GO:0006355
Tpr6g0098 417 MobiDBLite consensus disorder prediction 241 300 - -
Tpr6g0098 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 278 293 IPR004827 GO:0003700|GO:0006355
Tpr6g0098 417 MobiDBLite consensus disorder prediction 153 223 - -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 14 28 - -
Tpr6g0098 417 Gene3D - 274 328 - -
Tpr6g0098 417 MobiDBLite consensus disorder prediction 202 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0098 Tpr-Chr6 805288 810417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0098 1 417 bZIP Transcription Factor Family AT2G46270 53.774 1.13e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g0098 MFMR_assoc 9.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0098 K09060 - gmx:100781875 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0098 6 805288 810417 Tpr6g0098 6 805288 810417 ECH