Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g0082 | ATGGAAAAGACTACTTCTAAGAGAAAACATGTTAGTCTGATCAATGAATTGATCCAAGGAAAAGAGCTAGCAAAGCAGCTAAGCAACCATATAGTTTTATGTTCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCCACCTATCAGAAAACACTTACTATGCTCGACCATTGGCCTAATTTGGAAGGAGAGAATAAGACCATTGATGATGGTAACAATAGGGATTCTCATTGTTCTTTTACAAATGAGAGTCCCAAAAGTGAGGTTATTATTAAGAACAAAGCTCTCTTCAAGAAAAGGAAGAGCATGGACACATGGAAAGAGCAAGTGAAGTTTTGTACAAACAAAGGATTGTTTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTATAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGATCAGATGAAGATCCAACAATAATTGAGGTTACTTACAAAGGAAGACACACATGTTCTCAATCTAAGCCTTTAAAAAAGGATTTTCCCTCAAAATTAAATATAATAGGTTTAGACAAAAATAAACTCCACAATGATAAAAAGAATCAACTACAACAAACACAAGAAGCTAGTTTCACTTTGAAAGCAGAACTTGATGTGAAAAGAATGGACTTAGAAGAAACCAAAGAAGATATCTTCCCTTGGTTTTGTTTTTCTTCTCCATCAATTGAATCAGAAAATGAGACTATGAGGGAAAGTTTTTGTCATGGATTTATATCACCAGAAACTTCAGAAGCAAACTTTTTTGGTTTGTCAGAATATCAATTGGGCTGCATTGGATTATGCCAAAATGTAGTACAAACTTCAGAATCTGATATCACTGAGACAGTTTCAGCCACAACTTCAGTCACCAATTCACCAATCCTTGATTTGGATATTTTGTTACATAGAGGGGATTTTGACACTGATTTTCCTTTTAACATCTCTGAATATTTCTCTTCATAA | 1044 | 0.342 | MEKTTSKRKHVSLINELIQGKELAKQLSNHIVLCSNETNEFLIDKIISTYQKTLTMLDHWPNLEGENKTIDDGNNRDSHCSFTNESPKSEVIIKNKALFKKRKSMDTWKEQVKFCTNKGLFEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYKGRHTCSQSKPLKKDFPSKLNIIGLDKNKLHNDKKNQLQQTQEASFTLKAELDVKRMDLEETKEDIFPWFCFSSPSIESENETMRESFCHGFISPETSEANFFGLSEYQLGCIGLCQNVVQTSESDITETVSATTSVTNSPILDLDILLHRGDFDTDFPFNISEYFSS* | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g0082 | 347 | Pfam | WRKY DNA -binding domain | 126 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g0082 | 347 | ProSiteProfiles | WRKY domain profile. | 125 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g0082 | 347 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 344 | IPR044810 | GO:0003700 | |
Tpr6g0082 | 347 | Gene3D | WRKY domain | 114 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g0082 | 347 | PANTHER | WRKY TRANSCRIPTION FACTOR 46-RELATED | 1 | 344 | - | - | |
Tpr6g0082 | 347 | SUPERFAMILY | WRKY DNA-binding domain | 124 | 187 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g0082 | 347 | SMART | WRKY_cls | 125 | 187 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g0082 | Tpr-Chr6 | 694478 | 696277 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g0082 | 1 | 338 | WRKY Transcription Factor Family | AT4G11070 | 34.493 | 4.47e-43 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr6g0082 | WRKY | 5.6e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g0082 | - | - | mtr:MTR_7g117200 | 481.87 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tpr6g0082 | 6 | 694478 | 696277 | Tpr6g0082 | 6 | 694478 | 696277 | ECH | |
Tpr5g1428 | 5 | 27298611 | 27301899 | Tpr6g0082 | 6 | 694478 | 696277 | ECH | |
Tpr3g0573 | 3 | 5667456 | 5669278 | Tpr6g0082 | 6 | 694478 | 696277 | ECH | |
Tpr6g0082 | 6 | 694478 | 696277 | Tpr5g1428 | 5 | 27298611 | 27301899 | PCT |