Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0082 ATGGAAAAGACTACTTCTAAGAGAAAACATGTTAGTCTGATCAATGAATTGATCCAAGGAAAAGAGCTAGCAAAGCAGCTAAGCAACCATATAGTTTTATGTTCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCCACCTATCAGAAAACACTTACTATGCTCGACCATTGGCCTAATTTGGAAGGAGAGAATAAGACCATTGATGATGGTAACAATAGGGATTCTCATTGTTCTTTTACAAATGAGAGTCCCAAAAGTGAGGTTATTATTAAGAACAAAGCTCTCTTCAAGAAAAGGAAGAGCATGGACACATGGAAAGAGCAAGTGAAGTTTTGTACAAACAAAGGATTGTTTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTATAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGATCAGATGAAGATCCAACAATAATTGAGGTTACTTACAAAGGAAGACACACATGTTCTCAATCTAAGCCTTTAAAAAAGGATTTTCCCTCAAAATTAAATATAATAGGTTTAGACAAAAATAAACTCCACAATGATAAAAAGAATCAACTACAACAAACACAAGAAGCTAGTTTCACTTTGAAAGCAGAACTTGATGTGAAAAGAATGGACTTAGAAGAAACCAAAGAAGATATCTTCCCTTGGTTTTGTTTTTCTTCTCCATCAATTGAATCAGAAAATGAGACTATGAGGGAAAGTTTTTGTCATGGATTTATATCACCAGAAACTTCAGAAGCAAACTTTTTTGGTTTGTCAGAATATCAATTGGGCTGCATTGGATTATGCCAAAATGTAGTACAAACTTCAGAATCTGATATCACTGAGACAGTTTCAGCCACAACTTCAGTCACCAATTCACCAATCCTTGATTTGGATATTTTGTTACATAGAGGGGATTTTGACACTGATTTTCCTTTTAACATCTCTGAATATTTCTCTTCATAA 1044 0.342 MEKTTSKRKHVSLINELIQGKELAKQLSNHIVLCSNETNEFLIDKIISTYQKTLTMLDHWPNLEGENKTIDDGNNRDSHCSFTNESPKSEVIIKNKALFKKRKSMDTWKEQVKFCTNKGLFEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYKGRHTCSQSKPLKKDFPSKLNIIGLDKNKLHNDKKNQLQQTQEASFTLKAELDVKRMDLEETKEDIFPWFCFSSPSIESENETMRESFCHGFISPETSEANFFGLSEYQLGCIGLCQNVVQTSESDITETVSATTSVTNSPILDLDILLHRGDFDTDFPFNISEYFSS* 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0082 347 Pfam WRKY DNA -binding domain 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0082 347 ProSiteProfiles WRKY domain profile. 125 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0082 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 344 IPR044810 GO:0003700
Tpr6g0082 347 Gene3D WRKY domain 114 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0082 347 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 344 - -
Tpr6g0082 347 SUPERFAMILY WRKY DNA-binding domain 124 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0082 347 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr6g0082 Tpr-Chr6 694478 696277 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0082 1 338 WRKY Transcription Factor Family AT4G11070 34.493 4.47e-43 149
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g0082 WRKY 5.6e-26 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0082 - - mtr:MTR_7g117200 481.87
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0082 6 694478 696277 Tpr6g0082 6 694478 696277 ECH
Tpr5g1428 5 27298611 27301899 Tpr6g0082 6 694478 696277 ECH
Tpr3g0573 3 5667456 5669278 Tpr6g0082 6 694478 696277 ECH
Tpr6g0082 6 694478 696277 Tpr5g1428 5 27298611 27301899 PCT