Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g0061 | ATGGACTCTCCATCAGGTGGCCGTCCTAAATTGCCGGCGAAGCGAGGTGACGTCGCCGGAGAGAACCACATGCCGCAGCTTAAGAATCAAATCAAGAACAAAATTGAAGAGGCTGAACAACACATGTCCAACAATAAGAGGAAGAAGATCGTCGTCACCGATCTAAGTAACGGATCAGTCTCGGAGCTGAATCGAAACTCGACGAGAAAGAAGAAGAAACCGATTGATCAAGAGAAGGAAGGTGATTGTGGCAAGGGATTAATTGATGTGTATAAGGTCAACAAAGCCAAAAATGGAGTTAAAGATACCAAAAAACAGGCTTATCAGGGTTTATCCAGCAAAACCAAGGAGAGTGGAAGTTTGATGTGTCATCAGTGCCAACGGAATGATAAGAGTGGCGTCATCTTTTGCTCGAGTTGCAACAGAAAGCGCTATTGTTACGAGTGCATTGAGAACTGGTACCCGGGAAAAACCCGAGAGGACTTCAAGAATGCATGTCCGTTTTGTTGGGGCAACTGCAACTGCAAAGCTTGCTTGCGGGAGTTTCCTGTGCTAATGGTAGATGTCATCCTTTTATTTTCAAAATTCAAAAATAAACTATATGTGATTTATATTTATATGCTTACTGTTGAGTTTATTCAACTCTTGTCCTTATTTTCACAGGAAAGGGAAGTAAATGCCAGTGTCAAATTACCGCGGCTGTTGTACTTGCTATCTAAAGCTCTTCCAGTTCTGAGGCATATCCACAGGGAGCAGAGCTTCGAACTAGAGACTGAAATCAAAATAAGAGGTAAGCAACTGCAAGAAGTTGACATAACAAGAACAAAGCTAGATGAAAGTGAGCGCTTGTACTGTGACAATTGCAGTACATCCATATATGGATTTTACCGTAGCTGCCCCAACACAAGTTGCTCTTATGATCTCTGTCTTGTTTGCTGTCAAGAGCTCAGAGAGGGTTACCAACCTGGCGGCATGGAGGCTGGAACATCTCATGAAAAATTTGAAGAGATTTTTCACAATCACAATTCAACAAAAAATCAGAGTAAAACACGTCGTAAAAGATATGACTGGGAAAGCGAACTTGCACCTACTAGTGTTCCTTCTCAGGCTGACATGTTCTCTCCCTTCCCAGAATGGAAAGCTAATTGTGATGGTAACATTCCATGTCCTCCAAAGCAGCGTGGAGGTTGTGGTACTGCATTGCTAGAACTGAGACGCATTTACAAAGCTAATTGGGTAGCAAAACTGCTAAATAATGCTGAGGATCTCACTAGAAATTACACGCCTCTGGATGTGGATATTACTGAAAAGTGTTCTTTATGTCAGCTAAATTTGTTTGAAGGAAAAATCAACCCTGACGTCAGGAGGGCATCATTCCGGAATGACAGTAAAGATAACTTCTTATATAGTCCAAATGCCCTTGACATTTCTGATGATGAGATCGAGCACTTCCAGAGGCACTGGATGAGGGGTGAACCTGTGATTGTGAGAAATGTTCTGGCCAAAACATCAGGTCTTAGTTGGGAACCAATGGTTATGTGGAGGGCCCTCAGAGAAACAGGTTCCAAAGCGAAGTTCAAAGAGGAAACACAAAGTGTTAAGGCTGTAGATTGCTTGGATTGGTGTGGGGTTGAAATAAATATACACCAATTTTTCAAAGGCTACGTAGAAGGCCGAATGCATATAAATAAGTGGCCAGAAATGTTGAAATTGAAAGATTGGCCTTCATCGACCTCATTTGAAGAGCGCTTGCCTAGGCATGGTGCTGAATTCCTTGCTGCACTTCCCTATATGGACTACACTGATCCAAAATCAGGTCTTTTAAATTTTGCCAGTAAACTTCCTGCTGGCTCGTTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGAAGAGCTTGGCCGAGGAGATTCTGTGACAAAACTGCACTGCGATGTGTCTGATGCGGTGAATGTGTTGACACACACAAACAAGGTGAATATAGCTCCCTGGCAGAGAGAAAACATAAATAAATTGAAGAAGGAATATGGTAAAGAAGACTATTTGGAACTCTATCGTGAAGCTTTAGATAATGTTGATGTAAAATCCAAATCTAAAGCATTGGACCATGATCAAAAGGCAGAGAATGGAGTTAACCGGATTTTACCAAGTAGCCAAGTAGAAAAGTGTATTTCATCAATATCCGAAGACTTGAGTGGCAAGGTAGAAACACAGAACACAGAACAATGTGATGATAACGGAAAGGGCTCTTGCACCTATAGAAATGTTGCTGTAAGGAACTCCTCTGAGGATGATAGTGTTAGCATAACATCATCCGCTGAAGTTTCGGATTATTCTAGGACTTCTGACCTGGAGCAGCTTCAATCTGCAACCAGCTTAGCATCAAGTAATGCAAACATAAAGAAAGACAGAGTGAAGATTGATTTTTCAGATGGTAATGTGTCTGGTGATCCCAAGATTGAATCAAAACAAGGCATGGGGAGAGATTCTTTGGACATTGATAATGGAGCTGCGGCTGTCCTTGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCAAAAATAATTGAGTACTTAAGAAAGCACAAGAAGGAATTTCGCCACATCAACAACAAACCTGTTGATTCAGTTATACATCCCATTCATGATCAGACTATATTCTTAAATGAGAGACATAAGAAACAGCTAAAAAGAGAATTTAAAGTTGAACCATGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAGTCTTGTATGAAGGTTGCACTTGACTTTGTTTCTCCTGAAAATGTTGGAGAATGTTTACGACTGACTGAAGAGTTTCGTTTACTCCCGAAGAACCACAGGGCCAAGGAGGACAAATTGGAGGTTAAAAAGATGACCCTTTATGCTGTGAGTAATGCTGTTAGACAAGTTAAAGAACTGGTTGATAGCCAATGA | 2997 | 0.4161 | MDSPSGGRPKLPAKRGDVAGENHMPQLKNQIKNKIEEAEQHMSNNKRKKIVVTDLSNGSVSELNRNSTRKKKKPIDQEKEGDCGKGLIDVYKVNKAKNGVKDTKKQAYQGLSSKTKESGSLMCHQCQRNDKSGVIFCSSCNRKRYCYECIENWYPGKTREDFKNACPFCWGNCNCKACLREFPVLMVDVILLFSKFKNKLYVIYIYMLTVEFIQLLSLFSQEREVNASVKLPRLLYLLSKALPVLRHIHREQSFELETEIKIRGKQLQEVDITRTKLDESERLYCDNCSTSIYGFYRSCPNTSCSYDLCLVCCQELREGYQPGGMEAGTSHEKFEEIFHNHNSTKNQSKTRRKRYDWESELAPTSVPSQADMFSPFPEWKANCDGNIPCPPKQRGGCGTALLELRRIYKANWVAKLLNNAEDLTRNYTPLDVDITEKCSLCQLNLFEGKINPDVRRASFRNDSKDNFLYSPNALDISDDEIEHFQRHWMRGEPVIVRNVLAKTSGLSWEPMVMWRALRETGSKAKFKEETQSVKAVDCLDWCGVEINIHQFFKGYVEGRMHINKWPEMLKLKDWPSSTSFEERLPRHGAEFLAALPYMDYTDPKSGLLNFASKLPAGSLKPDLGPKTYIAYGFSEELGRGDSVTKLHCDVSDAVNVLTHTNKVNIAPWQRENINKLKKEYGKEDYLELYREALDNVDVKSKSKALDHDQKAENGVNRILPSSQVEKCISSISEDLSGKVETQNTEQCDDNGKGSCTYRNVAVRNSSEDDSVSITSSAEVSDYSRTSDLEQLQSATSLASSNANIKKDRVKIDFSDGNVSGDPKIESKQGMGRDSLDIDNGAAAVLGGAVWDIFRRQDVPKIIEYLRKHKKEFRHINNKPVDSVIHPIHDQTIFLNERHKKQLKREFKVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCMKVALDFVSPENVGECLRLTEEFRLLPKNHRAKEDKLEVKKMTLYAVSNAVRQVKELVDSQ* | 999 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g0061 | 998 | SMART | cupin_9 | 584 | 961 | IPR003347 | - | |
Tpr6g0061 | 998 | ProSiteProfiles | Ig-like domain profile. | 625 | 774 | IPR007110 | - | |
Tpr6g0061 | 998 | MobiDBLite | consensus disorder prediction | 38 | 78 | - | - | |
Tpr6g0061 | 998 | MobiDBLite | consensus disorder prediction | 49 | 64 | - | - | |
Tpr6g0061 | 998 | PANTHER | TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN | 1 | 184 | - | - | |
Tpr6g0061 | 998 | PANTHER | TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN | 221 | 997 | - | - | |
Tpr6g0061 | 998 | SUPERFAMILY | Clavaminate synthase-like | 481 | 980 | - | - | |
Tpr6g0061 | 998 | Pfam | JmjC domain, hydroxylase | 847 | 944 | IPR003347 | - | |
Tpr6g0061 | 998 | Pfam | Zinc-finger domain of monoamine-oxidase A repressor R1 | 120 | 181 | IPR018866 | - | |
Tpr6g0061 | 998 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tpr6g0061 | 998 | Gene3D | Cupin | 471 | 769 | - | - | |
Tpr6g0061 | 998 | Gene3D | Cupin | 770 | 970 | - | - | |
Tpr6g0061 | 998 | ProSiteProfiles | Zinc finger RING-type profile. | 123 | 169 | IPR001841 | - | |
Tpr6g0061 | 998 | PANTHER | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN | 221 | 997 | IPR045109 | GO:0032454|GO:0033169 | |
Tpr6g0061 | 998 | PANTHER | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN | 1 | 184 | IPR045109 | GO:0032454|GO:0033169 | |
Tpr6g0061 | 998 | Coils | Coil | 24 | 48 | - | - | |
Tpr6g0061 | 998 | Coils | Coil | 988 | 998 | - | - | |
Tpr6g0061 | 998 | ProSiteProfiles | JmjC domain profile. | 603 | 961 | IPR003347 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g0061 | Tpr-Chr6 | 536611 | 546227 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Jumonji | Tpr6g0061 | JmjC | 3.3e-16 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g0061 | K15601 | - | vvi:100258626 | 1051.2 |