Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0040 ATGTCTTCTTCAGAGATTCTCCAACAACTTGAATCACTCAAAGACGAAAAAACCAAAATCGAACACAAAATATCACTTCTTGAAGCTCAATTGAAAGATATTAATCTCCATAAACACAATGGCTCTTCTTCACCTTACCCTACAAATGGATTGGAACCTCATATGATTCATAGATACAGTCGCCACCTTGTTCTTCCTTCCTTTGGTGTTCAAGGGCAAGCAAATCTGTTGAAGTCGTCGATTTTAGTTGTGGGGGCTGGAGGATTGGGTGCTCCTGCGTTGTTATATTTTGCAGCTTCGGGTGTTGGTAAATTGGGAATAGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATACACACCGAAGCATATATTGGTCAGCCAAAAGTGAAATCCGCTGCTGCTGCTTGTCGCTCGGTTAACTCATCTATTGAAGTCGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTTTCAGCAAGTACGATATAATAGTAGATGCAACGGATAATGCTCCCACCCGGTATATGATCAGTGACTGCTGTGTGGTACTAGGCAAGCCACTTGTATCAGGTGCTGCTTTGGGATTAGAAGGGCAGCTCACTGTCTACAACCACAACGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTCGAACAGCATGCCAAAGTTGCGCTGACGGTGGAGTACTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCAATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCCGGAAGGATGCTTCTCTTAGACGCATTGTCTGCACGGATCCGTGTTGTTAAAATCAGAGGAAGGTCTATGCAATGTGAAGCTTGTGGAGAAAATGCAAAATTTAATCAGCAGTACTTCCTAGAATTTGATTATGAGAACTTCACTCAGACTCCATTGTGTGTGCCTCCTTTGAAGTTAAATCTAATTCCTAGTGAATCAAGAATCAGCAGCAAGGAGTACAACGAAATAATTGTCAACAAGGAACCACATGTGTTGGTTGATGTTAGACCATCTCACCATTTCAAGATTGTGTCACTTCCGAATTCTTTGAACATTCCATTCTCAACTTTAGAGTCTAGGTTGCCGGAAATATCATCAATTTTGAAGAAAGATGAAGAGGAAAAAGGCGTGGTTTCTGAATCAAGTGCACGATTATATGTAGTATGCAGAAGGGGAAATGACTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGTTTTACTTCTGCTAAGGATATTGTTGGGGGTTTGGAGTCTTGGGCTCAAAATGTTGATCCTAACTTCCCTACTTATTAG 1359 0.4209 MSSSEILQQLESLKDEKTKIEHKISLLEAQLKDINLHKHNGSSSPYPTNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGKLGIVDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSVNSSIEVVEHEEALRTSNALEIFSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNHNGGPCYRCLFPTPPPRTACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALSARIRVVKIRGRSMQCEACGENAKFNQQYFLEFDYENFTQTPLCVPPLKLNLIPSESRISSKEYNEIIVNKEPHVLVDVRPSHHFKIVSLPNSLNIPFSTLESRLPEISSILKKDEEEKGVVSESSARLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAQNVDPNFPTY* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0040 452 Gene3D - 334 452 IPR036873 -
Tpr6g0040 452 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 1 452 IPR028885 GO:0002143|GO:0004792|GO:0005829
Tpr6g0040 452 Coils Coil 3 30 - -
Tpr6g0040 452 Pfam ThiF family 59 294 IPR000594 -
Tpr6g0040 452 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 56 419 IPR035985 GO:0008641
Tpr6g0040 452 ProSiteProfiles Rhodanese domain profile. 347 450 IPR001763 -
Tpr6g0040 452 CDD ThiF_MoeB_HesA_family 58 286 - -
Tpr6g0040 452 CDD RHOD_ThiF 327 452 - -
Tpr6g0040 452 Gene3D - 53 302 - -
Tpr6g0040 452 Pfam Rhodanese-like domain 339 443 IPR001763 -
Tpr6g0040 452 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 438 IPR045886 -
Tpr6g0040 452 SMART rhod_4 337 447 IPR001763 -
Tpr6g0040 452 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0040 Tpr-Chr6 408490 413044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0040 97 452 Sulfurtransferasese or Rhodanese AT5G55130 73.109 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0040 K11996 - gmx:100814736 763.066