Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0039 ATGGGTTCAAATGCCAAAACTTATACTTTTGAGGAAATCGCCAAACACAACAACAAAAAAGATTGCTGGATTATTGTCAACGGAAAGGTGTATGATGTGACCCCATTTTTGGATGATCATCCAGGAGGCGACGAATCTTTAATTTCATCAACAGGGAAGGATGCTACAGTTGATTTTGAAGACGTGGGTCACAGTGACTCTGCCATTGAAATGATGCATAAATACTTTATTGGGCATGTCGACACATCCACCATGCCAACTGAAGTTAAAAACAATCCGCCGCCATCTAAACAAACACCCAAAGTTAGCGATCAATCATCAGGATTTGTTTCAAAGGCATTGCAATTCCTGTTGCCGTTGCTCATATTGGCCATTGCATTTGCTATGCAGCACTATGGAAAAAAGAAACAAGTCAGCGACTCATAA 426 0.4061 MGSNAKTYTFEEIAKHNNKKDCWIIVNGKVYDVTPFLDDHPGGDESLISSTGKDATVDFEDVGHSDSAIEMMHKYFIGHVDTSTMPTEVKNNPPPSKQTPKVSDQSSGFVSKALQFLLPLLILAIAFAMQHYGKKKQVSDS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0039 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Tpr6g0039 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Tpr6g0039 141 Gene3D - 1 86 IPR036400 -
Tpr6g0039 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tpr6g0039 141 SMART Cyt_b5_2 8 81 IPR001199 -
Tpr6g0039 141 MobiDBLite consensus disorder prediction 85 104 - -
Tpr6g0039 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tpr6g0039 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tpr6g0039 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tpr6g0039 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tpr6g0039 141 PANTHER CYTOCHROME B5 ISOFORM C 1 136 - -
Tpr6g0039 141 PANTHER CYTOCHROME B5 1 136 - -
Tpr6g0039 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 94 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0039 Tpr-Chr6 405794 407137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0039 1 136 NADPH P450 reductases AT5G48810 55.147 1.05e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0039 K23490 - gmx:100306380 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0039 6 405794 407137 Tpr5g1495 5 28380046 28384627 PCT