Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0022 ATGTCTCCTTCAACAACACAGTCTAATGAACAACAAATCCCCAACGGAAAAGACAAGAATCTCCTGAAAACACAACAAGATGATGAAGAAGCCCTCCAATTTGCCTCACAAATAACAGGTTCCATTGTTGTTCCATTGGCTTTGCGGTCAGCCATTGATCTTGGCATCTTTGACATCCTAGCCAAAGCAGGTGAAGGAGCACAACTATCTGCACAAGACATTGCTGTTGAGATTGGAACCAACAACCCGGAAGCACCAACAATGTTGGATCGTCTTCTTAGGTTGTTGGCCAGTCACTCTATTCTAAACTCATCTGTTCCTCAACATCCACAAAGCCTTCAAATATTCTACAGCCTCTCTAATCGCTCCAAATATTTTGTCACCGATGCTGATGGTATCTCGTTGGGACCCACCTTGGCATTAATCCTCGACAATGTCTTCTACCAAAGTTGGTCGGAGCTGAAAGGAGCGATAATGGAAGGAGGAATACCGTTCAATAGAGTATATGGAATGCATGCCTTTGAGTATCCACGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGGTTAACTCAACCACTATAAATATGAAGAGGATTCTTGATCATTATCAAGGTTTTGAGCATGTCACTAAGGTGGTTGACGTTGGTGGTGGTCTTGGACATAACCTCAAATTGATCACAGCCAAATATTCTCATATTCAGGGAATTAATTTTGACTTGCCTCATGTCATCCAAAATGCTCCTAACTACCCAGGTGTTGAACATGTGGGAGGAGATATGTTTGAGAGCGTTCCTGCAGGGGATGTCGTTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCTTGAAGGTGTTGAAAAATTGTTACAAAGCTATTCCAGAGGATGGAAAGGTTATTGTTGTGGACTCAATCCTTCCGGCCATGCCGGAGACAACAGGGAGTGCCAAGTTTGGTTATGCGTCTGATCTTGTAATGATGACTCAAAATCCAGGAGGAAAAGAGAGAACTGAGCAGCAATTCATAGAATTGGCAAAAGGATCTGGTTTTAGTGGCATAAAACCTATATGTTGTGTCTCTGGACTATGGGTTATTGAGTTCTTTAAGTAA 1125 0.4204 MSPSTTQSNEQQIPNGKDKNLLKTQQDDEEALQFASQITGSIVVPLALRSAIDLGIFDILAKAGEGAQLSAQDIAVEIGTNNPEAPTMLDRLLRLLASHSILNSSVPQHPQSLQIFYSLSNRSKYFVTDADGISLGPTLALILDNVFYQSWSELKGAIMEGGIPFNRVYGMHAFEYPRVDPRFNDVFNKAMVNSTTINMKRILDHYQGFEHVTKVVDVGGGLGHNLKLITAKYSHIQGINFDLPHVIQNAPNYPGVEHVGGDMFESVPAGDVVFMKWILHDWSDEHCLKVLKNCYKAIPEDGKVIVVDSILPAMPETTGSAKFGYASDLVMMTQNPGGKERTEQQFIELAKGSGFSGIKPICCVSGLWVIEFFK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0022 374 PIRSF O-mtase 15 374 IPR016461 GO:0008168
Tpr6g0022 374 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Tpr6g0022 374 Gene3D Vaccinia Virus protein VP39 127 374 IPR029063 -
Tpr6g0022 374 PANTHER O-METHYLTRANSFERASE 1 374 IPR016461 GO:0008168
Tpr6g0022 374 SUPERFAMILY "Winged helix" DNA-binding domain 26 129 IPR036390 -
Tpr6g0022 374 Gene3D - 15 126 IPR036388 -
Tpr6g0022 374 Pfam Dimerisation domain 47 97 IPR012967 GO:0046983
Tpr6g0022 374 CDD AdoMet_MTases 214 307 - -
Tpr6g0022 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 372 IPR029063 -
Tpr6g0022 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 374 IPR016461 GO:0008168
Tpr6g0022 374 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0022 Tpr-Chr6 290011 291710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0022 18 374 Monolignol Biosynthesis Gene Families AT5G54160 51.955 4.72e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0022 K13066 - gmx:100789402 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0022 6 290011 291710 Tpr6g0022 6 290011 291710 ECH