Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0021 ATGGGCGATGATCTTCCTGATCAATCGAAGAATGAAGAATTACAAGACGAAGAAAGTTTCGCATATGCTATTCAACTCTGCAACTCTGTTGTTCTATCCATGGCACTTCAATCTGCAACTGAACTCGGCGTATTTGAAGTCTTACAAAAAGCAGGTACAGATGTTAAACTATCCGCCGATGAGATCGCTTCTCGTCTTTCCTGTACAAATCCAGATGCCTCCAAAATGTTAGATCGTATTCTCGCTCTTCTTGCTTCTCACTCCGTCATCAACTGTTCTGTACTTCCCGATCAACATAACTTTGGATCTTTTCATAGATTCTACACTATGGCTCCTGTTGCCAAATTCTTTGCTCCTAATTCCGATGGCGTTTCTTTAGGACCCTTGATTGCTTTGCATCATGATAAGATCTTCTTGGATAGCTGGTCTCAGCTTAAAGATGCAATTCGTGAAGGGGGTGTTCCATTCAACAGGGTTCATGGCACTCATGCCTTTGAGTATCCAAGTTTGGACTCAAGGTTCAATCAAGTTTTTAATACAGCAATGATCAATCACACTACTATTGTTATGAAGAAAGTTCTTGAATGCTACAAAGGTTTTGATGAGGTCAAAAGGCTTGTGGATGTTGGTGGTGGTCTCGGGGTTAACATTAACTTGATCACTTCAAAATACCCTCATATACAGGGTATCAATTTCGACTTGCCTCATGTCATACAACACGCCCCTTCCTATCCTGGAATTGAACACGTTGGGGGAGATATGTTTGAAAGTGTGCCTAAAGCAGATGCAATCTTTATGAAGTGGATACTTCATGACTGGAGTGATGAGCAGTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCAGATGATGGAAAGGTGATTGTTTTGGAGGCAGTTCTTTCTATTATACCCGAGAATAATGCTGCCTGGAAATTTGCAGCCCAGTCAGATGTTCTGATGATGACTCAAAATCCAGGAGGGAAAGAGCGAACTGAGCAAGAATTCATGGATTTAGCAAATGGAGCTGGATTTAGTGGCATTAGATATGAGTGTTATGTCCATACTTTTTGGGTTATGGAGTTCTTTAAGTAG 1098 0.4098 MGDDLPDQSKNEELQDEESFAYAIQLCNSVVLSMALQSATELGVFEVLQKAGTDVKLSADEIASRLSCTNPDASKMLDRILALLASHSVINCSVLPDQHNFGSFHRFYTMAPVAKFFAPNSDGVSLGPLIALHHDKIFLDSWSQLKDAIREGGVPFNRVHGTHAFEYPSLDSRFNQVFNTAMINHTTIVMKKVLECYKGFDEVKRLVDVGGGLGVNINLITSKYPHIQGINFDLPHVIQHAPSYPGIEHVGGDMFESVPKADAIFMKWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQNPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0021 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Tpr6g0021 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Tpr6g0021 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 363 IPR029063 -
Tpr6g0021 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 120 IPR036390 -
Tpr6g0021 365 PANTHER O-METHYLTRANSFERASE 15 365 IPR016461 GO:0008168
Tpr6g0021 365 PIRSF O-mtase 4 365 IPR016461 GO:0008168
Tpr6g0021 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Tpr6g0021 365 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
Tpr6g0021 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 15 365 - -
Tpr6g0021 365 Gene3D - 3 117 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0021 Tpr-Chr6 281115 284802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0021 1 365 Monolignol Biosynthesis Gene Families AT5G54160 51.233 3.36e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0021 K13066 - gmx:100803633 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0021 6 281115 284802 Tpr6g0021 6 281115 284802 ECH