Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0014 ATGGCGGAGGAACTCGATAAACCTTTGCTTGATCCCGATAATTTCAACCGCGAGGGAATTGATTTGGAGCGCATACCACTAGAGCAAGTATTTGAACAGTTGAAAACATCACCGAGAGGACTTTCATCCGATGATGCTGAAGCCCGACTTCACATATTTGGCCCAAACAAACTTGAAGAGAGGAAAGAGAATAAAATATTGAAATTTCTTAGTTTTATGTGGAATCCTCTTTCATGGGTTATGGAAGCAGCGGCACTGATGGCAATTGTCCTTGCCAATGGCGGAGGGGAGGGTCCTGATTGGCAAGACTTTGTAGGGATTGTATGCTTGCTGGTAATAAACTCAACAATTAGTTTTATAGAAGAAAATAATGCTGGTACTGCTGCAGCAGCATTGATGGCTCGCTTAGCTCCTAGAACAAAGGTTCTAAGAGATGGCCAGTGGCAAGAAGATGATGCAGCTATTTTAGTACCTGGTGATATAATAAGCATAAAGCTGGGAGATATCATTCCAGCCGATGCTCGTTTGCTCGAAGGAGACCCTCTCAAAATTGACCAGTCAGCCCTTACTGGAGAGTCCCTACCTGTCACAAAAAAAACTGGTGATGAGGTCTTTTCAGGCTCCACATGCAAACACGGAGAGATTGAAGCCGTAGTGATAGCAACAGGGGTTCATTCCTTTTTTGGAAAAGCAGCACACTTGGTTGACAGTACCGAAGTTGTTGGACACTTTCAGAAGGTTCTTACCTCAATTGGTAACTTCTGCATTTTCTCTATAGCTATAGGGATGATTCTTGAAATAATTGTAATGTTCCCCGTGGAGCACCGATCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTGATTGGAGGAATTCCCATTGCTATGCCAACAGTATTATCTGTAACGCTTGCCATTGGATCCCATCGCCTTTCTCAGCAGGGAGCTATTACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACGGGTACTCTTACGCTAAATCGCCTGAGTGTTGATCAAAATCTTATAGAGGTCTTTAACAACAATATGGACAAAGATATGATTGTTCTACTAGCAGCTAGGGCAGCTAGATTGGAAAATCAGGATGCCATTGATGCTGCCATTGTTAATATGCTAGCTGATCCAAAGGAGGCTCGTGCAAACATCACTGAAGTTCATTTTCTACCATTCAATCCCGTAGACAAACGTACAGCATTAACATACATTGATTCTGATGGCAACTTTTACAGGGCCAGCAAAGGAGCTCCAGAACAGATTCTAAATATGTGCCAAGAGAAAGACATAATTGCCGGAAAAGTGCATGCAATCATAGACAACTTTGCTGCAAGGGGATTGCGATCTCTTGCGGTTGCTTTTCAGGAAGTTCCTGAAAAATCCAAGGATAGCCTTGGAAGTCCGTGGACTTTTTGTGGTTTATTGCCTTTGTTTGATCCACCGAGACACGATAGTGCTGAGACCATCCGAAGAGCACTTAACCTTGGAGTTTGTGTTAAGATGATTACAGGGGATCAGTTGGCTATTGCAAAGGAGACAGGCAGAAGACTAGGCATGGGGACAAATATGTACCCTTCTTCATCTTTGTTGGGTCGCAACAAAGATGCGAATGAAGCTCTCCCAGTAGACGAACTCATTGAAAAGGCAGATGGATTTGCTGGTGTATTTCCTGAACACAAATATGAAATAGTCAAGATTTTACAAGAAAAGCAACATGTTGTTGGAATGACTGGAGATGGAGTAAATGATGCCCCAGCATTGAAGAAAGCGGATATTGGAATAGCTGTGTCAGATGCTACAGATGCTGCAAGAAATGCTGCTGATATAGTCTTGACCGAGCCTGGGTTAAGTGTTATTATTAGCGCTGTGTTAACTAGCCGAGCTATATTTCAAAGGATGAAAAATTATACAATATATGCAGTCTCCATCACCATAAGGATAGTGCTTGGTTTTGTGCTCCTAGCATTAATCTGGGAGTATGATTTTCCACCCTTCATGGTCCTGATCATTGCAATCCTAAATGATGGTACTATCATGACCATAGCTAAAGACAGAGTAAAGCCGTCCCCAACACCTGACAGTTGGAAACTGCCTGAGATATTTGCAACAGGAGTAGTGATTGGCACTTACCTTGCTTTGGTTACTGTCCTGTTCTACTGGGCAGTAGTTGAGACCACTTTCTTTGAGACCTACTTCCATGTAACCTCTCTATCCAGTGAGAGTGAGAAAGTTTCGTCGGCTGTATATCTCCAAGTTAGCATCATTAGCCAGGCTCTAATTTTTGTTACTCGTAGCCGTGGTTGGTCATTTCTAGAGAGACCTGGAACTTTATTGATTTGTGCCTTTGTAATAGCTCAACTGGTGGCCACCTTAATTGCAGTCTATGCAAATATCAGTTTTGCTGAAATTCAAGGGATTGGATGGGAATGGGCTGGTGTTATATGGTTATTTAGTTTAATATTCTATGTACCCTTGGACATCATTAAGTTCACAGTGCGCTATGCCTTGAGCGGAGAAGCTTGGAATCTCCTATTTGACAGAAAGACTGCTTTTACATCTAAGAAAGACTATGGGACGAAAGATAGGGCAGCAAAGTGGGTTCTTTCACAGGGAAGTCTGCAAGGACTAAATCAGATGTCCTCGGGCTTGGAGGTCAGTGGAAGGCGGTCTTCTCTAATAGCTGAGCAGGCCAGACGACGTGCTGAAATAGCCAGGCTGGGGGAGTTGCACACACTCAGAGGACATGTAGAGTCTGTTTTGAGACTGAAAAATTTAGACCTGAAGGCGATCCAATCAGCTCACACGGTCTGA 2859 0.4316 MAEELDKPLLDPDNFNREGIDLERIPLEQVFEQLKTSPRGLSSDDAEARLHIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIVLANGGGEGPDWQDFVGIVCLLVINSTISFIEENNAGTAAAALMARLAPRTKVLRDGQWQEDDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCIFSIAIGMILEIIVMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDQNLIEVFNNNMDKDMIVLLAARAARLENQDAIDAAIVNMLADPKEARANITEVHFLPFNPVDKRTALTYIDSDGNFYRASKGAPEQILNMCQEKDIIAGKVHAIIDNFAARGLRSLAVAFQEVPEKSKDSLGSPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRNKDANEALPVDELIEKADGFAGVFPEHKYEIVKILQEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARNAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTIAKDRVKPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWAVVETTFFETYFHVTSLSSESEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGTLLICAFVIAQLVATLIAVYANISFAEIQGIGWEWAGVIWLFSLIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGTKDRAAKWVLSQGSLQGLNQMSSGLEVSGRRSSLIAEQARRRAEIARLGELHTLRGHVESVLRLKNLDLKAIQSAHTV* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0014 952 CDD P-type_ATPase_H 40 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr6g0014 952 Pfam haloacid dehalogenase-like hydrolase 331 607 - -
Tpr6g0014 952 SUPERFAMILY HAD-like 331 640 IPR036412 -
Tpr6g0014 952 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Tpr6g0014 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 852 IPR023298 -
Tpr6g0014 952 Pfam E1-E2 ATPase 136 314 - -
Tpr6g0014 952 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 811 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr6g0014 952 SFLD p-type atpase 317 644 IPR044492 -
Tpr6g0014 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 678 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 356 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 SFLD C1.7: P-type atpase like 317 644 - -
Tpr6g0014 952 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 932 - -
Tpr6g0014 952 Gene3D - 347 494 IPR023299 GO:0000166
Tpr6g0014 952 Gene3D - 332 630 IPR023214 -
Tpr6g0014 952 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Tpr6g0014 952 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Tpr6g0014 952 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Tpr6g0014 952 Gene3D - 100 820 - -
Tpr6g0014 952 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0014 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Tpr6g0014 952 Gene3D - 138 222 - -
Tpr6g0014 952 Gene3D - 904 952 - -
Tpr6g0014 952 PANTHER CALCIUM-TRANSPORTING ATPASE 1 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0014 Tpr-Chr6 189585 199381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0014 1 952 Primary Pumps ATPases AT1G17260 80.147 0.0 1533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0014 K01535 - zju:107434382 1649.03