Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0012 ATGGTGGATGTTGGAGGAGGAGGAGGAGGAGTAAGGTTGTTGATGCTTATGCTGTTCTTCAGCTGCTGCATTATTGCTGTCACTGCCACTACAGATCCAACTGATGTTACTTCTGTAAAGGCTATATTTCAAAGCTTGAATTCACCTCCCCAACTAGGTTGGCCTGCTAACGGCGATGATGATGATGATCCGTGTGGTCAGTCTTGGAAAGGCATTACTTGTTCAGCCAACCGCGTTACACAGATTCAGTTATCCAATCTTGCTCTAACTGGAACATTGGCTTACGGATTACAAGGCTTAACATCTCTGACCACTCTAGATATGAGTAACAACAATCTTGTCGGAACTATACCATACCAACTTCCTCCAAATGTGCAGCGCTTAAATTTTGCTTATAATAACTTGACTGGGACAGTCCCTTACTCTATTTCTAACCTGACCTCTCTTACAGACCTGAATCTCAATCACAATCAGCTCCAGCAAGCACTGAATGTCAACTTTCAAAATCTTACTACCCTCTCCAAATTAGACCTGTCTTCCAACTCTTTGACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCAGGCATAACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACTGTTGATATTCTTGCTAATCTGCCTCTGAATAGTCTGAATGTAGAAAACAATAATTTCACAGGATGGATACCGGAGCGGTTGAAAAACATAGACCTTCAGATGGGTGGTAATGCGTGGAGCTCAGGACCTGCACCACCACCTCCTCCTGGGACGCCTCCAGTACTTAAAAGCAACCAACACCACAAACCCGGTGGTGGAAGAAGTACCACTGGCCAACATCCCAGCAGCGACACAATCAATGAGGGCAAAAAATCTGGAATTGGAGGTGGTGGAATAGCTGGAATTGTGATCTCCATCATTGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATATTCCGATTTAGAAAAGTTGGGCAATCAGTCTACTGCTCCTCTTCCTTCAAATGAAGTGCATGAAATTACGTCTGTGCAGACTTCTTCCATGCTTGACTTGAAGAAGTTGGATACTTCTGACTCAATAAATATCAAGCCCCCGCCTATTGATCGTCATAAGTCATTTGAGGACAACGAATTCTCAAACAAGCCCACTATAGACAAGAAGATTGTAACAGCTCCTGTAGATATCCAATCATATTCTATAGCCGATCTTCAGATTACTACTGGCAGCTTCAATGTGGATCATCTTGTTGATGAGGGGTCTTTTGGGCGTGTGTATCGTGCTCAATTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGATTCTTCTGAAGATTTTATAGAAATAGTGTCAAACATCTCCTATTTACATCATCCAAACGTAACAGAGCTTGTAGGTTATTGCTCAGAGCATGGACAACACCTCTTAGTTTACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACGTGTCAGATGAATACAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGGACTGCACGCGCTTTAGAGTACCTGCATGAAGTTTGTTCTCCATCAGTTGTGCATAAGAATATTAAGTCAGCCAATATATTACTTGATGCAGAGCTTAATCCTTATCTTTCAGACTGTGGATTGGCAAACTATATTCCAAATGCAGAGCAGATATTAAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACCTTTCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAGCTTCTAAGTGGACGGAAACCATTTGATAGCTCAAGGGCAAGACCGGAGCAGTCTTTGGTTCGATGGGCAACACCCCAGCTTCATGACATTGATGCATTGGCTAAGATGGTTGATCCTAAGTTGAAAGGGCTATATCCTGTTAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTCAGACCACCAATGTCAGAGGTGGTTCAAGCGCTGGTACGATTAGTGCAGCGAGCTAACATGAGCAGGCGGACGTTCACATTTGGAAGTGATCATGGAGGATCCCTACGAGGAAGTGATGAGCCAGCTATACGTGACATCTAA 2187 0.4312 MVDVGGGGGGVRLLMLMLFFSCCIIAVTATTDPTDVTSVKAIFQSLNSPPQLGWPANGDDDDDPCGQSWKGITCSANRVTQIQLSNLALTGTLAYGLQGLTSLTTLDMSNNNLVGTIPYQLPPNVQRLNFAYNNLTGTVPYSISNLTSLTDLNLNHNQLQQALNVNFQNLTTLSKLDLSSNSLTGDLPQTMSSLSGITTMYLQNNQFTGTVDILANLPLNSLNVENNNFTGWIPERLKNIDLQMGGNAWSSGPAPPPPPGTPPVLKSNQHHKPGGGRSTTGQHPSSDTINEGKKSGIGGGGIAGIVISIIVVGAIVAFFLVKRKSKKSYSDLEKLGNQSTAPLPSNEVHEITSVQTSSMLDLKKLDTSDSINIKPPPIDRHKSFEDNEFSNKPTIDKKIVTAPVDIQSYSIADLQITTGSFNVDHLVDEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDSSEDFIEIVSNISYLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHVSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPYLSDCGLANYIPNAEQILNHNVGSGYDAPEVALSGQYTFQSDVYSFGVVMLELLSGRKPFDSSRARPEQSLVRWATPQLHDIDALAKMVDPKLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTFTFGSDHGGSLRGSDEPAIRDI* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0012 728 PANTHER OS01G0253100 PROTEIN 25 722 IPR045271 GO:0004714|GO:0006468
Tpr6g0012 728 MobiDBLite consensus disorder prediction 251 288 - -
Tpr6g0012 728 Gene3D Phosphorylase Kinase; domain 1 382 498 - -
Tpr6g0012 728 Gene3D Ribonuclease Inhibitor 36 187 IPR032675 -
Tpr6g0012 728 Gene3D Ribonuclease Inhibitor 188 251 IPR032675 -
Tpr6g0012 728 PRINTS Leucine-rich repeat signature 103 116 - -
Tpr6g0012 728 PRINTS Leucine-rich repeat signature 170 183 - -
Tpr6g0012 728 Gene3D Transferase(Phosphotransferase) domain 1 500 711 - -
Tpr6g0012 728 Pfam Protein tyrosine and serine/threonine kinase 424 693 IPR001245 GO:0004672|GO:0006468
Tpr6g0012 728 SUPERFAMILY Protein kinase-like (PK-like) 403 693 IPR011009 -
Tpr6g0012 728 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 25 722 - -
Tpr6g0012 728 MobiDBLite consensus disorder prediction 272 288 - -
Tpr6g0012 728 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0012 728 SMART LRR_typ_2 100 128 IPR003591 -
Tpr6g0012 728 SMART LRR_typ_2 146 169 IPR003591 -
Tpr6g0012 728 SMART LRR_typ_2 170 194 IPR003591 -
Tpr6g0012 728 SUPERFAMILY L domain-like 40 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0012 Tpr-Chr6 174937 182516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0012 16 706 Strubbelig Receptor Gene Family AT1G53730 62.731 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr6g0012 PK_Tyr_Ser-Thr 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0012 - - gmx:100807707 1075.46