Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0005 ATGGGTGGTTCAGGAAGCTGGTTTAAATCACTTATTCCACCAAAAAAGCCCTCCACCAATAATCAAGTGAAGAGTATTGATAAGAGTAAGAGAAAATGGAAGTTATGGAGGAATTCTTCAGAAAGTATTGGATTTGGAACCTCTATGAAGAAGGGACATGGTTTTGTTGCTTATGATAAATATTCATGTTCTTCATTTGTGGTGAATGAACAAGCTTTTGCTGCTGCAATGGCTGCTGTAGTAAGAACTCCACACAAAGACTTCTTGTTGATTAAGCAGGAATGGTCTGCCATCCGTATCCAGTCTGCATTTCGAGGCTTCTTGGTTGTTGAAAATTAA 339 0.3864 MGGSGSWFKSLIPPKKPSTNNQVKSIDKSKRKWKLWRNSSESIGFGTSMKKGHGFVAYDKYSCSSFVVNEQAFAAAMAAVVRTPHKDFLLIKQEWSAIRIQSAFRGFLVVEN* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0005 112 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 108 - -
Tpr6g0005 112 PANTHER IQ-DOMAIN 5-RELATED 1 108 - -
Tpr6g0005 112 ProSiteProfiles IQ motif profile. 93 112 IPR000048 GO:0005515
Tpr6g0005 112 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0005 Tpr-Chr6 88285 89616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0005 1 109 IQD Protein Family AT1G72670 47.368 4.64e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0005 - - lja:Lj3g3v2669620.1 129.798