Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3493 ATGGAAGGAGAAAGAGATGTTCCTAATTATGAGCTTCAAGTTTCATTCACAAACACTCCTCAAGCTATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCATGTTCTTAGCTTCTTGTCACCCTCTACACAATCTCAACCTTCTCTTTCTCAATCTCTAAATTCCGGCGGTAGCACTACCAACGTCGCTACCGGTTCAGCTGCCACAACCAGCACCACGACCGCCGGATTTAGCCATAATGATCTTGTTACAAGAATTCCTTGGAATAATGAACAGGTGAGAACTCTAGATCCTAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGGTCAGAGAAGAGCAAGGTGAAAGTGAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAGACAAGAAGTGATGTGGATGTACTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGTCTTCATCCAAGAAGTTATTACCGTTGCACACATACCAACTGTCGGGTGAAAAAAAGAGTTGAAAGACTCTCAGAAGATTGTCGTATGGTGATAACTACTTATGAAGGAAGACACAATCACACTCCTTGTGATGACTCTAATTCTTCTGAACATGAATGTTTTACCTCTTTCTGA 678 0.413 MEGERDVPNYELQVSFTNTPQAIHEMGFVQFEENHVLSFLSPSTQSQPSLSQSLNSGGSTTNVATGSAATTSTTTAGFSHNDLVTRIPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGSEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHTNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHECFTSF* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3493 225 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 223 - -
Tpr5g3493 225 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3493 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 223 IPR044810 GO:0003700
Tpr5g3493 225 ProSiteProfiles WRKY domain profile. 146 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3493 225 MobiDBLite consensus disorder prediction 48 71 - -
Tpr5g3493 225 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3493 225 Gene3D WRKY domain 138 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g3493 225 SUPERFAMILY WRKY DNA-binding domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3493 Tpr-Chr5 57831979 57836906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3493 3 225 WRKY Transcription Factor Family AT2G44745 56.277 8.85e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g3493 WRKY 2.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3493 - - var:108347245 363.614