Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3491 ATGGTAAAATTTGATGAATCTCTAGATGTTGATTCTAATGAAGTTAGTTCAACTGATAGTCATACATCTGATGATGAGAATTCCAGCTATTCGGCATCCAGTGGGCATGATAGGTCAGATGATGGCGATGATCATGGTGACCACCATGATGATGGTGATGATGATGATGATGATGATGATGGCAATGACCATGATTTTGCTGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGATTTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAGATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATTCGACTCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTCTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCGTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCCCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTAAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACAAAGTTTTATACTTTGACTAAATATTGTCGGGATGCGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCAGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCATGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTCTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAATGGTGTGTATGGTGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACGCAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAATGCGAGGACTTGTTCGGATAAAAAGAGAAAAAAAAGTTGCAACGCTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACGTTGGTGAAAGTAGTGTGCGACAGAAAAAGAAGAAATGTGCAGAGCAACCGAAAGACCTTTGCGAAAGTAGTGTGGCACCAAAAAAGAAGAAATGTTCAGAGCTACCGAAAGACCTTTGTGAAAGTATTGTGCAAAAGAGAAATAAATGTTCGGTGCAATTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGACCGGGCAATTCACTCCGATGTATGGATTTCAACATATGATTCCTATGTTACATCCGGTTATGCAACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTCTATACCAACTGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACAGGTGATGAAATCTGCTGATGGTAAACAATGA 2793 0.3903 MVKFDESLDVDSNEVSSTDSHTSDDENSSYSASSGHDRSDDGDDHGDHHDDGDDDDDDDDGNDHDFADEASIGERAVRINSMTADEIRGMDFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDSTHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDAYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSVLTSFCKEASKKNGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDAKALRHCTHCKSTTHNARTCSDKKRKKSCNAESSVQDINSELPVDVGESSVRQKKKKCAEQPKDLCESSVAPKKKKCSELPKDLCESIVQKRNKCSVQLKERGANVSTPTHIDVTSATGQFTPMYGFQHMIPMLHPVMQQMHVPSGQHVPPAQHVTSVPHVPPLYQLYGMNVGANSTSCYGLLQQVMKSADGKQ* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3491 930 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 754 IPR031052 GO:0006355
Tpr5g3491 930 SMART 26again6 603 630 IPR006564 GO:0008270
Tpr5g3491 930 MobiDBLite consensus disorder prediction 11 35 - -
Tpr5g3491 930 MobiDBLite consensus disorder prediction 1 58 - -
Tpr5g3491 930 PANTHER OS02G0262500 PROTEIN 87 754 - -
Tpr5g3491 930 ProSiteProfiles Zinc finger SWIM-type profile. 592 628 IPR007527 GO:0008270
Tpr5g3491 930 Pfam FAR1 DNA-binding domain 100 194 IPR004330 -
Tpr5g3491 930 Pfam MULE transposase domain 317 411 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3491 Tpr-Chr5 57799493 57802848 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g3491 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3491 - - ccaj:109792835 880.937