Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3489 ATGGGGGAACCTCCGGATGAATTGAAAACAAACATTGATGAACCCGACTCTGTTAATGTTGTCGAACATGTCATTGTTCAACCTAATGTTGTGGAACTTGTCATTGCTCAACCTAATGTTGTGGAACCGGCCGTTAATGTTGTGGAACCCAGTGATAATGAGCATAAAGTTGACACGGGAAAATATTTTCATGATGCACCGTATTGCAATGAGCGAGATGAGTTGATCAAATGGTGTCGCAATGAGGCAAAAAAAGCTGGATTTACTATTGTGATTGCTAAATCAGATAACGGTTCTTACCGAAGGAAAAGGTATTTTGTGTTGGGTTGCGAAAGAGGTGGGGAGTACAAAGAGAGGATAAGGAAATTAAAGAATGAGGACACAGCTACGAGGAAATGTAACTGTCGGTTTAGGTTGCGAGGTTACTTTTTGTCAACACAGGTATGGAGTCTAAATGTAGTGAACGGCGAGCATAACCACGAGCTGTCGAATAACCATGAAGGTCATATTCTTGCGGGACGTTTACAACCGGAGGAGAAGGAGGTTGTATGCGAGTTGACAAGAAATTTGGTGGCCCCAAAGAACATTTTGTCCACATTGAAAGGGCGAAATCCAGAGACCAAAATTTCAATGAAAGCTGTCTACAATGCGCGCCAAAGGCTCAAGAAAGAACTTAGGGGTGAAATGACTGAAATGCAACAACTAATGAAGTGTTGTGAGAGTAACAAATATTTTCACAAGTGTAGAACAGTTGGTGACTCTACAACTATACAAGATATTTTTTGGGCACATCCGGAAAGTGTGATTTTGTTTAACACTTTCCCTACTGTTTTGATGTTGGATTCAACTTACAAAACCAACAAGTATAAAATGCCGTTATTTGAGATAGTTGGTGTAACTTCTACCGAAAAATCGTACAACGTTGGTTTTGCATATATTGCGAATGAAAAAGAAGAAGACTTCATATGGGCCCTTGAGACGTGTCGGAGTCTACTGAAGAGTAAAGACACAGTGCCGAAGGTCATTGTCACTGATAGGGATCAGGCACTGATGAATGCAGTTGCGAAAGTGTTTCCAAAATCAACAGCTTTACTGTGTCGGTTTCATATTTATAAGAACGTGAAAGCTAAGTTCACGACTCTTTGCAACGCAAAAGAAGAAAACATGGTCAAGTTAAAGAAAACACTCGCATGTCAATGGAAATCAGTTGTAGAATCGACAACAGAAGAGTCGTATATTGATGCTGTCGTTGATTTCAGGAAAGTGTTTGACCATTATCCAAATTTTGTCAAATATGTTGAAACAATGGTTTTAGATCAGGTGAAGGAAAAAATTGTGAGTGTATGGACAAATCGTGTTATGCACATTGGAAACACTACAACCAACAGAGTTGAGTCTCAACATGGAGTGTTGAAACAATACTTGCCGGATTGTAAGGGTGATTTGGTCAAGGGTTGGGAAGCGACAAATGAAATGGTTTCAAACCAGTTGATAAAAATAAAGACGTCATTTGGACAGAGTACTAGTGCCGTTGAACACTATTTTAAAAAGCACTTTTTGTACCCTAAGTTGGTGTATAACATATCTAGACAAGCCTTACACTTTATTAGGGATGAAGAAATTCGTTCCCGCGAATGTGGTAAGAATCGGAAAAAGTGTGGTTGTGTGATGAAGATAACATACGGGTTGCCATGTGCTTGTCTAATAGCATTGAAGAGGGACAAAAAACTACCTATTAGACTGGACGAGATTAACACTCATTGGAAGAGGTTACAAATTGACGAAGCAGATGATGGACAGGTTGACTGCTCGAAGGAGTTTAGGGTCATTCAGGAACGGTTGAGATTATCAAATCAGAGTATGCAGCTACAAATTAGGGATCAACTGCGACAGATAGCTTTTCCAGAAATTACATCGCTAACTGCACCGGTCAAACAGGTAGATACAAAGGGTGCAAAAAAACGGGCAAAGTCAAGTAAATGTAACAGTTCTACCACTAGATCTCCATCTTATTGGGAGCACATTGATGCCCGATATCCTGACAGTCAGGCATCACAATCAAAACCAGCCAAACCCAAAAGGAAGACTGCTCGCATAGGCACTTTGTCTCCTAATGCTATACCTCGCCGTTCAATTCCGTTTATGGAGCATATGCCAATGTTCATGCATTCATATATTGAGGACATTATTGATGTTAAAGGGGATGGGCATTGTGGATTCCGCGTTGCAGCAGAGTGTCTTAATAAGGGCGAAGATAGTCAAGGATTAGTTCGTTCAAAACTTATCAGAGAGTTAACCATGTTTAGGAAAGAGTACCTGCCTATTTTCGGTACTGAGGCACGTCTACAATACATTCTTGATGGTTTGTTCCCTCCCAAGGTAATGCCTAAGAATGGCATTGCACCGGAAGAAAAATGGTTCACATTTCCAGATATGGGCCATATCCTTGCAACGGCCTACAACCGTGTTGTAGTATGTTTGACATCGCATCATATAGGTTATTCTGAAACATTTTTTCCACTGCGTACCAAGCCACCGTTTGATCCATCTGCACACATTATTTGTATTGGTATGGTTCCATATCACTGTGTCAATGTAAAACTGAAGTCTGGATGTCCACTTCCTCCTACTAATAAGAGCTGGAAAATTCATCGGGCACCGGAGGCTGAGACTTGGGAAGATACATTTTTGGACCGGATGAGTGAGTTTGACGAACTCATGAAGAATGAAAAAGGTGATTTGAAGAAGGAGATCAATAAAGATGATCCTATAACATTTTCAGATGACTAG 2790 0.405 MGEPPDELKTNIDEPDSVNVVEHVIVQPNVVELVIAQPNVVEPAVNVVEPSDNEHKVDTGKYFHDAPYCNERDELIKWCRNEAKKAGFTIVIAKSDNGSYRRKRYFVLGCERGGEYKERIRKLKNEDTATRKCNCRFRLRGYFLSTQVWSLNVVNGEHNHELSNNHEGHILAGRLQPEEKEVVCELTRNLVAPKNILSTLKGRNPETKISMKAVYNARQRLKKELRGEMTEMQQLMKCCESNKYFHKCRTVGDSTTIQDIFWAHPESVILFNTFPTVLMLDSTYKTNKYKMPLFEIVGVTSTEKSYNVGFAYIANEKEEDFIWALETCRSLLKSKDTVPKVIVTDRDQALMNAVAKVFPKSTALLCRFHIYKNVKAKFTTLCNAKEENMVKLKKTLACQWKSVVESTTEESYIDAVVDFRKVFDHYPNFVKYVETMVLDQVKEKIVSVWTNRVMHIGNTTTNRVESQHGVLKQYLPDCKGDLVKGWEATNEMVSNQLIKIKTSFGQSTSAVEHYFKKHFLYPKLVYNISRQALHFIRDEEIRSRECGKNRKKCGCVMKITYGLPCACLIALKRDKKLPIRLDEINTHWKRLQIDEADDGQVDCSKEFRVIQERLRLSNQSMQLQIRDQLRQIAFPEITSLTAPVKQVDTKGAKKRAKSSKCNSSTTRSPSYWEHIDARYPDSQASQSKPAKPKRKTARIGTLSPNAIPRRSIPFMEHMPMFMHSYIEDIIDVKGDGHCGFRVAAECLNKGEDSQGLVRSKLIRELTMFRKEYLPIFGTEARLQYILDGLFPPKVMPKNGIAPEEKWFTFPDMGHILATAYNRVVVCLTSHHIGYSETFFPLRTKPPFDPSAHIICIGMVPYHCVNVKLKSGCPLPPTNKSWKIHRAPEAETWEDTFLDRMSEFDELMKNEKGDLKKEINKDDPITFSDD* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3489 929 Pfam MULE transposase domain 277 373 IPR018289 -
Tpr5g3489 929 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 540 IPR031052 GO:0006355
Tpr5g3489 929 Coils Coil 222 242 - -
Tpr5g3489 929 MobiDBLite consensus disorder prediction 645 701 - -
Tpr5g3489 929 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 106 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3489 Tpr-Chr5 57790823 57793710 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g3489 MULE 5.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3489 - - vun:114181823 592.423