Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3453 ATGCTACTGCTCTTATCTTCAACATCCTCTTCTTCACTCATGCAATCTTTTCCGTTAAAATTCCTTTGTGCTGTACAAGGACAAGGAGAATCAACTCATCGAAGCACTAATCAAAAACCGAAGGATTACATAGTGCAGGATGAGAAAGTATTAAGGAGGAAACTTATGATTTCTGTTTTGGTCTCAACTTGTGTTTTTCCAACATTATCTTCTCATGCGAAGACCAAAAGTATTAATCCGTATAATGAAAAACGTGTGCTACAACAAAATAAGAATATACAAAAACAAAACAATGCACCAGACGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTGATAACACCAGATAACTATATAACGCGTGATTCAGGGCTAATATACCGAGATTATGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCAGGTCACATTTCACTATGTTGGCTATAACGAATCTGGCCGCCGTATTGACAGTACTTATTTGCAAGGCACTCCTGCTAAAATTCGCATGGGTAACAAGGCTTTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAAAGCAGGTGGAAAGAGAAGAATAATCATTCCTCCTGATCTTGGACCCCCGGTAGGACCTTCAACATTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTATTAAGCATACAAAGCTGTGAAAGAAGAGTGATAGTAGGATTTTATTCTGATGTTGTATGCACTTGA 747 0.3748 MLLLLSSTSSSSLMQSFPLKFLCAVQGQGESTHRSTNQKPKDYIVQDEKVLRRKLMISVLVSTCVFPTLSSHAKTKSINPYNEKRVLQQNKNIQKQNNAPDDFPNFIREGFEVKVITPDNYITRDSGLIYRDYEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGTPAKIRMGNKALVPGFEEGIRDMKAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELLSIQSCERRVIVGFYSDVVCT* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3453 248 Gene3D - 81 237 IPR046357 GO:0003755
Tpr5g3453 248 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 24 248 IPR044239 -
Tpr5g3453 248 SUPERFAMILY FKBP-like 63 230 - -
Tpr5g3453 248 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 206 IPR001179 GO:0003755
Tpr5g3453 248 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 144 231 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3453 Tpr-Chr5 57434303 57437648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3453 139 233 Calmodulin-binding Proteins AT5G48570 35.052 1.50e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3453 - - mtr:MTR_8g006755 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3453 5 57434303 57437648 Tpr5g3453 5 57434303 57437648 ECH