Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3447 ATGCTACTTTATGAGTACATGGAAAAGGGTAGTTTGGGAGAGTTACTTCATGGCGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTCAGATTGCTCTAGGAACTGCACATGGACTCTCTTATTTGCACCATGATTGCAAGCCTAGGATTATTCACCGCGACATCAAGTCCAATAACATACTTATTGATCATGAATTTGAAGCTCATGTTGGTGATTTCGGTTTGGCCAAGCTAATTGATATCTCAAAGTCTAAATCAATGTCTGCAGTTGTTGGTTCTTACGGCTACATTGCACCTGGTGTTCAATGA 312 0.4038 MLLYEYMEKGSLGELLHGESSSSLDWYSRFQIALGTAHGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSMSAVVGSYGYIAPGVQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3447 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3447 103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Tpr5g3447 103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 100 - -
Tpr5g3447 103 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Tpr5g3447 103 PANTHER LRR RECEPTOR-LIKE KINASE 1 100 - -
Tpr5g3447 103 Pfam Protein kinase domain 2 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3447 103 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3447 Tpr-Chr5 57404668 57407185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3447 1 100 Receptor kinase-like Gene Family AT1G75820 63.366 3.16e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g3447 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3447 - - osa:4336341 162.155