Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3420 ATGTTTGGGCGTGGACCAGCAAGGAAGAGTGATAACACGAAATATTATGATATTCTTGGTGTTTCAAAAAGTGCCAGTGAAGATGAAATCAAGAAAGCCTATAGAAAAGCAGCGATGAAGAACCATCCGGATAAGGGTGGGGATCCTGAGAAATTCAAGGAGTTGGGTCAAGCATATGAAGTGTTAAGTGATCCTGAAAAGAAAGAACTGTATGATCAATATGGTGAAGATGCCCTTAAAGAAGGAATGGGAGGAGGCGGAGGAAGCTCATTTCATAATCCATTCGATATTTTCGAATCATTTTTTGGTGGAGGAGGTTTTGGTGGTGGTGGTCCTTCACGGGGAAGAAGACAGAAGCAAGGAGAAGATGTGGTGCATTCCTTAAAGGTTTCCTTGGAGGACGTGTTTAATGGCACTACAAAGAAACTATCTCTTTCTAGAAATGTGCTATGCGCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACAGCTGGAAGGTGTTTTGGATGCCAGGGCACAGGTATGAAGATTACCAGAAGGCAGATTGGTCTGGGCATGATTCAGCAAATGCAACATGTTTGTCCTGAATGCAAAGGAACTGGTGAGGTCATCAGTGAGAGAGATAGATGCCCTCAATGCAAGGGAAACAAGATTTCTCAAGAAAAGAAGGTGCTGGAAGTGCACGTGGAAAAGGGGATGCAGCAGGGTCAAAAGATTGTATTCGAAGGACAAGCTGATGAAGCCCCTGACACAATCACGGGAGACATAGTGTTTGTCTTGCAAGTGAAGGGGCATCCGAAGTTCAGGAGGGAGCATGATGACCTCCATATTGAACACACACTCAGCTTAACTGAAGCGCTCTGTGGATTCCAGTTTAATGTCACACATCTTGATGGAAGGCAACTATTGGTCAAATCAAACCCTGGGGAAGTCGTCAAGCCAGGTCAACATAAAGCTATAAATGATGAGGGAATGCCACAACACAATAGGCCCTTCATGAGGGGACGCCTTTACATCAAGTTTAATGTTGAATTCCCAGATTCGGGATTTCTTTCTCCTAGCCAAAGCCTAGAATTAGAAAAGATATTACCTCAAAAGACAAGCAAGAAGTTGTCACAAAAGGAGCTAGATGATTGTGAGGAGGCCACCTTACATGATGTCAATTTTGCAGAGGAGATGAGTCGAAAGAAGCAACAATACCGTGAGGCTTATGATGACGATGATGATGAAGATGAGCATTCAATGCCTCGGGTACAATGTGCTCAACAGTAA 1272 0.4355 MFGRGPARKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKKELYDQYGEDALKEGMGGGGGSSFHNPFDIFESFFGGGGFGGGGPSRGRRQKQGEDVVHSLKVSLEDVFNGTTKKLSLSRNVLCAKCKGKGSKSGTAGRCFGCQGTGMKITRRQIGLGMIQQMQHVCPECKGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKGHPKFRREHDDLHIEHTLSLTEALCGFQFNVTHLDGRQLLVKSNPGEVVKPGQHKAINDEGMPQHNRPFMRGRLYIKFNVEFPDSGFLSPSQSLELEKILPQKTSKKLSQKELDDCEEATLHDVNFAEEMSRKKQQYREAYDDDDDEDEHSMPRVQCAQQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3420 423 SMART dnaj_3 13 67 IPR001623 -
Tpr5g3420 423 MobiDBLite consensus disorder prediction 393 423 - -
Tpr5g3420 423 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 148 219 IPR036410 -
Tpr5g3420 423 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 423 IPR044713 GO:0006457|GO:0030544
Tpr5g3420 423 ProSiteProfiles Zinc finger CR-type profile. 138 222 IPR001305 GO:0031072|GO:0051082
Tpr5g3420 423 Pfam DnaJ central domain 151 217 IPR001305 GO:0031072|GO:0051082
Tpr5g3420 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 268 347 IPR008971 GO:0006457|GO:0051082
Tpr5g3420 423 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Tpr5g3420 423 Gene3D - 265 347 - -
Tpr5g3420 423 Coils Coil 390 410 - -
Tpr5g3420 423 PANTHER CHAPERONE PROTEIN DNAJ A6 8 423 - -
Tpr5g3420 423 Pfam DnaJ C terminal domain 125 346 IPR002939 -
Tpr5g3420 423 CDD DnaJ_C 122 348 - -
Tpr5g3420 423 PRINTS DnaJ domain signature 16 34 IPR001623 -
Tpr5g3420 423 PRINTS DnaJ domain signature 47 67 IPR001623 -
Tpr5g3420 423 PRINTS DnaJ domain signature 67 86 IPR001623 -
Tpr5g3420 423 CDD DnaJ_zf 151 217 IPR001305 GO:0031072|GO:0051082
Tpr5g3420 423 Hamap Chaperone protein DnaJ [dnaJ]. 11 376 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tpr5g3420 423 Gene3D - 151 217 - -
Tpr5g3420 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 122 266 IPR008971 GO:0006457|GO:0051082
Tpr5g3420 423 Gene3D - 114 263 - -
Tpr5g3420 423 SUPERFAMILY Chaperone J-domain 10 110 IPR036869 -
Tpr5g3420 423 Pfam DnaJ domain 14 72 IPR001623 -
Tpr5g3420 423 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Tpr5g3420 423 Gene3D DnaJ domain 11 113 IPR036869 -
Tpr5g3420 423 CDD DnaJ 15 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3420 Tpr-Chr5 57148980 57153600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3420 15 74 C2H2 Transcription Factor Family AT1G74250 44.928 9.23e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3420 K09503 - gmx:100800590 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3420 5 57148980 57153600 Tpr5g3420 5 57148980 57153600 ECH