Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3417 ATGAGAATGAGAGGTTTAAACATGGAGTACTACCTGCCTATAATGGTTATGGTGTTAATACAGACTATATATGCAGGTTTGACTCTTGGCATAAGAATTGCACTTTTGGAAGGTATGAGCCCAATGGTATTTGTAGTCTACCGCTATGCTTTTGCAACCATTGTTCTTGCTCCCATAGCTTATATATCAGGGAGAAATTCTGGCTCATATTCCCTAAATTTAACAAGCTTTTCCTGGATATTCATCACCTCCCTAATTGGGTTTGCTTCTATTCTCGAATACATTACCTTGGATCAAAATTTACTTGCTTGGGGTCTATATCTAGTTTCTTCTTCAGTTACAAGTGTTATGTGCAATGTGGTTCCAGCCGTGACATTTGTAATAGCAGCTTTTGTAGGAATGGAGAAAGTGAATATTCGAAGTGTGAGAACTATAGCCAAAATAGTAGGAACAATCATATGTGTAAGTGGAGCAGCCTGCATAGCATTATTGAAAGGTCCAAAGCTGCTAAATGCAGAAAACGTACCTCCAAAATCAATCATAGGCGCAACCTTAGGAAGTGATGACAATTGGTTGCTTGGATGTGTTATTCTTTTTGGAAGTTGTGTTGCTTGGTCAATTTGGCTCATTTTGCAGGTTCCAGCTTATGAAAGCCATCCTAATTCCTTATCACTTTCAGCTTGGATGTGTTTAATGGCAACATTACAATCATCAGTAGTGGCACTATTCATGAAGCCAGACCTGAATGCATGGAAGATCAATTCTCTACTTCAATTTGGTTGCATTTTATATTCGGGAGTTATGGGATCTGCAGTAGCATTATGTCTCCAAGCATGGTGCATTTCAAAGAGAGGACCTGTCTTTTCTGCTATGTTTACTCCTGTTTGTACTGTAATTGTGACTGTATTAGCTGCCTTGTTACTTCATGAGGAAATATACATTGGAAGCTTGATAGGTGGAATTGGAGTGATCATTGGCTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTGGTTGATGTTAAAGAGAAGATAATTCCAAAAGCTATGGTTAATGAGACAGAGGAAATTGTTGACAATAAATCTTATGGAAAAGCATATAGTAAAACTGATTTGGAAGAACCACTTTTATCTCATGAATCTACATACTATTGA 1155 0.3775 MRMRGLNMEYYLPIMVMVLIQTIYAGLTLGIRIALLEGMSPMVFVVYRYAFATIVLAPIAYISGRNSGSYSLNLTSFSWIFITSLIGFASILEYITLDQNLLAWGLYLVSSSVTSVMCNVVPAVTFVIAAFVGMEKVNIRSVRTIAKIVGTIICVSGAACIALLKGPKLLNAENVPPKSIIGATLGSDDNWLLGCVILFGSCVAWSIWLILQVPAYESHPNSLSLSAWMCLMATLQSSVVALFMKPDLNAWKINSLLQFGCILYSGVMGSAVALCLQAWCISKRGPVFSAMFTPVCTVIVTVLAALLLHEEIYIGSLIGGIGVIIGLYIVLWGKAEDVVDVKEKIIPKAMVNETEEIVDNKSYGKAYSKTDLEEPLLSHESTYY* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3417 384 PANTHER WAT1-RELATED PROTEIN 14 360 IPR030184 GO:0016021|GO:0022857
Tpr5g3417 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 163 - -
Tpr5g3417 384 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Tpr5g3417 384 Pfam EamA-like transporter family 14 158 IPR000620 GO:0016020|GO:0016021
Tpr5g3417 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 334 - -
Tpr5g3417 384 PANTHER WAT1-RELATED PROTEIN 14 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3417 Tpr-Chr5 57102955 57128420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3417 7 382 Nodulin-like Gene Family AT4G30420 50.513 1.53e-128 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3417 - - gmx:100812331 457.988