Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3416 ATGAGAGGTTTAAACATGGAGTACTACCTACCAATAATTGTTATGTTGTTGATACAATTTATATTTGCAGGTCAAACTCTTGGCACAAGAATTGCACTTTTGGAGGGTATGAGCCCAAGGGTATTTGTAGTGTACCGTAGTGCTTTTGCAACTATTGTTCTTGCCCCTCTTGCTTATTTTTCAGGGAGAAACTCTGGCTCATATTCCTTAAATTTAAGGAGTTTTTCCTTGATATTCTTGACCTCACTAATTGGAATTACAATGAATCAAAATTTATATTTTGAGGGTCTATATCTTGCTTCTTCTTCAGTTGCAAGTGCCATTTGCAATCTTCTTCCGGCAATCACATTTGTAATAGCAGTCTTAGTAGGAATGGAGAAAGTGAATATTCGAAGTTTGAGAAGTATAGCCAAAATAGTGGGAACAATTATATGTGTAAGTGGAGCAGTGTCCATAGCATTGTTGAAGGGTCCAAAGTTGCTAAATGCAGAAAGCATACCTTCAAAATCAATCTTTGGTTTAGCCTCAGAAAGTGATGAGAATTGGTTGCTTGGATGTTTGTCTCTTCTAGGATGCATTGTTGCATGGTCAATTTTTCTAATTTTGCAGGTTCCAGCTTATGCAAGTCATCCAAATTACTTATCACTTTCAGCTTGGATGTGTTTTATGGCAACATTACAATCAGCAGCAGTTACACTATTCTTGGAGCCAAACCTTAATGAATGGAAGATTAATTCTCTACTTCAACTTGGTTGTTCAATATATGCAGGAGTTATGGGTTCTGCAGTAACATTCTGTCTCCAAACATGGTGCATTAAAAGGAGAGGACCTCTCTTCTATGCTATGTTTACTCCTGTTTTCACATTAATTTGTACTGTATTGGCTGCTTTATTACTACATGAAGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATCATTGGTTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATATAGTTGATGTGAAAAAGAACATAGATCCAAAAGCTATGGTTGATGAGACAGAGGAAGCATATTGTAAAACTGATTTAGAAGAACCTCTTTTACATGCTGAATCTACCTCACATCATTGA 1104 0.3641 MRGLNMEYYLPIIVMLLIQFIFAGQTLGTRIALLEGMSPRVFVVYRSAFATIVLAPLAYFSGRNSGSYSLNLRSFSLIFLTSLIGITMNQNLYFEGLYLASSSVASAICNLLPAITFVIAVLVGMEKVNIRSLRSIAKIVGTIICVSGAVSIALLKGPKLLNAESIPSKSIFGLASESDENWLLGCLSLLGCIVAWSIFLILQVPAYASHPNYLSLSAWMCFMATLQSAAVTLFLEPNLNEWKINSLLQLGCSIYAGVMGSAVTFCLQTWCIKRRGPLFYAMFTPVFTLICTVLAALLLHEEIYIGSLIGAIGVIIGLYIVLWGKAEDIVDVKKNIDPKAMVDETEEAYCKTDLEEPLLHAESTSHH* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3416 367 PANTHER WAT1-RELATED PROTEIN 12 343 IPR030184 GO:0016021|GO:0022857
Tpr5g3416 367 PANTHER WAT1-RELATED PROTEIN 12 343 - -
Tpr5g3416 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 325 - -
Tpr5g3416 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 147 - -
Tpr5g3416 367 Pfam EamA-like transporter family 11 146 IPR000620 GO:0016020|GO:0016021
Tpr5g3416 367 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3416 Tpr-Chr5 57095811 57100371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3416 5 367 Nodulin-like Gene Family AT4G30420 51.200 2.07e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3416 - - gmx:100812331 491.5