Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3415 ATGGGATGCATAGACATAGAGTACTACATGCCAGTATTGGTTATGTTGTTGATACAATCTATATATGCAGGTATGAGTCTCGGCATAAGAGTCATACTTTTGGAGGGTATGAGTCCTAGAGTACTTGTTGTGTATCGCCATGCTTCTGCAACCATTGCTCTTGCTCCTGTTGCTTATTTATCAGGGAGAAACTCTGGCTCCTATTCCTTAAATTTAAGGAGTTTTTTCTTGATATTCATGACCTCACTAATTGGGATTACATTAACTCAAAATTTATATTTCGAGGGTCTATATCTTATTCCTTCTTCAATTGCGACTGCCATGACCAATCTTATTCCAGCAGTCACATTTATAATAACAGCCTCTGTAGGAATGGAGAAAGTAAATATTCGAAGTTTGAGAACTATTGCCAAAATTGTGGGAACATTGATATGTGTTGGTGGAGCAATGTCCATCACATTGTTGAAAGGTCCGAAACTACTAAATGCTGAAAATTTACCTTCAAAATCTACCATGGCTACAACCTTGGGAAGTGATGATAATTGGTTGCTTGGATGTCTTTTTGTTTTGGCAAGTAGTGTTGCCTGGTCATTGTGGCTCATTTTACAGGTTCCAGCTTATGCAAGTCATCCTAATTATATATCATTGTCAGCTTGGATGTGTTTAATTTCAACATTACAATCAGCAGTAGTAACGCTATTCTTGGAGCCAAACCTTAATGCTTGGAAGATTAATTCTCTCCTTCAATTTGGTTGCACTTTGTATTCAGGAATTATGGGATCTGCAGTTGTATTTTGTCTCCAAGCATGGTGCATTACAAAGAGAGGACCTCTTTTTTCTGCAATGTTTAGTCCTCTGGGAACAGTGCTTGTGACTGTATTGGCTGCCCTGTTGCTTCATGAGGAAATATACACTGGAAGCTTGATAGGCACAATTGGAGTGATAGTTGGCTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTCATAGAGAAAATAGATCCAAAATCGGCGTTTATTGAGACGGAGGAAGTGAAATTTTTGAGAAATGAATCTCGTGGAGAAGCAAGTTGTCGAATTAATTTGGAAGAACCGCTTTTAACCAATGTTTTAAACATAAAACCAGAGATCGAATCAACAAGACGTTCATGA 1152 0.3811 MGCIDIEYYMPVLVMLLIQSIYAGMSLGIRVILLEGMSPRVLVVYRHASATIALAPVAYLSGRNSGSYSLNLRSFFLIFMTSLIGITLTQNLYFEGLYLIPSSIATAMTNLIPAVTFIITASVGMEKVNIRSLRTIAKIVGTLICVGGAMSITLLKGPKLLNAENLPSKSTMATTLGSDDNWLLGCLFVLASSVAWSLWLILQVPAYASHPNYISLSAWMCLISTLQSAVVTLFLEPNLNAWKINSLLQFGCTLYSGIMGSAVVFCLQAWCITKRGPLFSAMFSPLGTVLVTVLAALLLHEEIYTGSLIGTIGVIVGLYIVLWGKAEDVIEKIDPKSAFIETEEVKFLRNESRGEASCRINLEEPLLTNVLNIKPEIESTRRS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3415 383 Pfam EamA-like transporter family 12 149 IPR000620 GO:0016020|GO:0016021
Tpr5g3415 383 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Tpr5g3415 383 PANTHER WAT1-RELATED PROTEIN 12 337 IPR030184 GO:0016021|GO:0022857
Tpr5g3415 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Tpr5g3415 383 PANTHER WAT1-RELATED PROTEIN 12 337 - -
Tpr5g3415 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3415 Tpr-Chr5 57085598 57088696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3415 5 382 Nodulin-like Gene Family AT4G30420 51.969 2.16e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3415 - - gmx:100812331 473.396