LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g3406	ATGGGCAAGTATAATGTTGGTTTAGTATTCTTTGTGTTTTTAGCTTTGACATCAATAATTTGTTTGGTGTGTAATGCCAGTGGTGATGAAAGCAGTAAAGTTTACATTGTATACATGGGGTCACTTCCTAAAGGAGCATCATATTCCCCAAGCTCTCACCATATTAACTTGTTGCAACAAGTTGTGGATGATATTGACATACAAAATTGCTTAGTACGAAGTTACAAGAGGAGTTTCAATGGTTTTGCTGCTATACTCAACGATCAACAAAGGAAAAAACTTGTGGGCATGAGAGGTGTGGTGTCAGTTTTTCCAAGCCAAGAGTACCACCTTCAAACCACAAGGTCGTGGGACTTCCTTGGTTTTCCTCAATCAATCAAGCGAGACCAAACTGTTGAAAACAATTTGGTGATTGGAGTAATAGATTCTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGGTCTTGGTCCAATTCCAAAAAAATGGAAGGGAGTTTGTGCAGGTGGTAGTAACTTCAGTTGCAACAAGAAAATAATCGGAGCACGATTTTACGGTAGTGGAGTTGAGAGTGCAAGAGACATTATTGGTCATGGAAGCCACACATCATCAACAGCAGGTGGAAGAGAGGTGAAAGGTGTGAGTTTTGATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGGATTGCTACATACAAAATTTGTGATTCACCTAGATGCAGTGGAGATGCTATTTTAGCTGCATTTGATGATGCCATTGCAGATGGAGTTGACGTCATCACCGTCTCTTTGGGTTCACAAACACAGGTTGACTTTGTCAATGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAACCAATGCTGCCGGAAACTTTGGTCCTAACCCAAGTAGTACTACAAGTGTAGCACCTTGGTTATTTACTGTTGCTGCAACTACCATTGATCGAAAATTCATTACTAAGCTAATTCTTGGAAATGGAAACACTTTCGTTGGTACATCAATCTATACTGGCCCTTCAAATGCTACCAAACTTCCAATAGCTGTGCGTAATGCTAAATATTGCCCCAATGGAAGAAATACAACCCCTGAAATGTGTGATTGTTTGGACAAAAGTATGGTGAAGGGAAAGCTTGTTTTGTGTGGAGCAGGTGGATTGTTTCCTACTTCTGATACAGGTATAATTGGTTCAATAATTAATGTTACGGACTCTGATTTTGATAATTCTGCTGTCACTTACAAGCCTTCCCTTAACTTGAAAACCAAGGACTTTGTTCAAGTTCAATCTTACACAAATTCTACTAAACACCCTGTTGCTCAAATTTTAAAGAGTGAGATTTTCCACGACACCAATGCTGCTCCTCAAGTTCCAATTTTCTCCTCTCGTGGCCCAAATCCTTTTGTTCCAGAAATTATGAAGCCAGATATAAGTGCTCCAGGAGTGAATATCTTAGCTGCATATTCACCTTTTGCGGGATCCACCTCAGGTGATATGGATGACAAGAGAAAGTTCAAATATAGCCTAGCAACTGGAACCTCTATGTCATGTCCTCACGTTGCTGGAGTTGTTGCATATGTAAAATCATTTCATCCAGATTGGTCACCTGCAGCTATAAAATCTGCCATTATGACGACCGCTAAACCTGTGAAAGGTACTTATGATGATTTGGCTGGAGAATATGCTTATGGTTCTGGGAATATCAATCCACAACAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTATGTAATTATGGTTATGATCAAAACAAAATTAAACAAATTAGTGGAGATAATTCCAGTTGCCATAGAGCTCCCGAAAGATCTTTGTTGAAAGATATAAACTATCCTGCAATGGTGATTCCAGTTTTGCCCGATAATAACCATTTCCATGTCAAGATTCATAGAATAGTCACAAACGTTGGCTTTTCTAACTCAACCTACAAGGCCACTCTCATCCATCATAATCCAAAAATCAAGATCAAAGTTGAACCAAAACTTCTTAAGTTCAAATCATTACATGAGAAGCAATCATTTGTTGTCACTATTATTGGGAGAGAGAAATTAAATCAAACTGTATTTTCCTCATCACTCATTTGGTCTGATGGCACCCACAACGTCAAAAGTCCTATTATTGTACAAATACTACCTCTATAA	2214	0.3911	MGKYNVGLVFFVFLALTSIICLVCNASGDESSKVYIVYMGSLPKGASYSPSSHHINLLQQVVDDIDIQNCLVRSYKRSFNGFAAILNDQQRKKLVGMRGVVSVFPSQEYHLQTTRSWDFLGFPQSIKRDQTVENNLVIGVIDSGIWPESESFNDKGLGPIPKKWKGVCAGGSNFSCNKKIIGARFYGSGVESARDIIGHGSHTSSTAGGREVKGVSFDGLAKGTARGGVPSSRIATYKICDSPRCSGDAILAAFDDAIADGVDVITVSLGSQTQVDFVNDPIAIGSFHAMEKGILTTNAAGNFGPNPSSTTSVAPWLFTVAATTIDRKFITKLILGNGNTFVGTSIYTGPSNATKLPIAVRNAKYCPNGRNTTPEMCDCLDKSMVKGKLVLCGAGGLFPTSDTGIIGSIINVTDSDFDNSAVTYKPSLNLKTKDFVQVQSYTNSTKHPVAQILKSEIFHDTNAAPQVPIFSSRGPNPFVPEIMKPDISAPGVNILAAYSPFAGSTSGDMDDKRKFKYSLATGTSMSCPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYDDLAGEYAYGSGNINPQQALHPGLVYDITKQDYVQMLCNYGYDQNKIKQISGDNSSCHRAPERSLLKDINYPAMVIPVLPDNNHFHVKIHRIVTNVGFSNSTYKATLIHHNPKIKIKVEPKLLKFKSLHEKQSFVVTIIGREKLNQTVFSSSLIWSDGTHNVKSPIIVQILPL*	738

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g3406	737	ProSiteProfiles	Serine proteases, subtilase domain profile.	108	584	-	-
	Tpr5g3406	737	Gene3D	-	326	459	-	-
	Tpr5g3406	737	CDD	PA_subtilisin_like	333	452	-	-
	Tpr5g3406	737	CDD	Peptidases_S8_3	109	557	IPR034197	-
	Tpr5g3406	737	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	33	734	-	-
	Tpr5g3406	737	Pfam	Peptidase inhibitor I9	34	111	IPR010259	-
	Tpr5g3406	737	Pfam	Subtilase family	135	560	IPR000209	GO:0006508\|GO:0008236
	Tpr5g3406	737	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	112	IPR037045	-
	Tpr5g3406	737	SUPERFAMILY	Subtilisin-like	111	588	IPR036852	GO:0004252\|GO:0006508
	Tpr5g3406	737	Gene3D	Peptidase S8/S53 domain	136	597	IPR036852	GO:0004252\|GO:0006508
	Tpr5g3406	737	Gene3D	-	601	735	-	-
	Tpr5g3406	737	ProSitePatterns	Serine proteases, subtilase family, serine active site.	522	532	IPR023828	-
	Tpr5g3406	737	Pfam	Fibronectin type-III domain	632	732	IPR041469	-
	Tpr5g3406	737	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	33	734	IPR045051	-
	Tpr5g3406	737	PRINTS	Subtilisin serine protease family (S8) signature	133	152	IPR015500	-
	Tpr5g3406	737	PRINTS	Subtilisin serine protease family (S8) signature	195	208	IPR015500	-
	Tpr5g3406	737	PRINTS	Subtilisin serine protease family (S8) signature	521	537	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g3406	Tpr-Chr5	56985010	56987356	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g3406	30	732	Subtilisin-like Serine Gene Family	AT5G59120	50.914	0.0	697

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g3406	-		-	mtr:MTR_1g006990	1038.1