Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3399 ATGGAAATCAAGCTAGAAAAGGAAGAAGGATATTATATATTAGAGATGGATGAGGCGATGGAGGAGCTAGTGAGAGGGCGTGAGTATGCCAACAAGCTTGGACAAGTATTACTACTAGCAGTCAATCATGATGATGATGAGTTGGCAATGGCAGCAACCCCATTATTATTTGCCCAACATCTTCTAAACAACATTCTTAACTCATTTACCAATACCCTCATCCTTTTGAAAAAAAATCATCAGATGCAACTTAAAAGGGACTTTTCTTTCATCACTCCAACTAAATCTCATGAAGACAACTCTCAAGATACTTCCACCCTTGCTGGTAGAGGATCTTACAAAAGAAGAAAAACTACAGAAACATGGGAGAAGATTTCAGAAAGTCCAATAGATGATGGGCATCAGTGGAGAAAGTATGGTCAAAAAACAATCCTCAATTCCAAATATTCAAGGGACTACTATAGGTGCACTCACAAGTTAGATCAAAGATGCGAAGCAACGAAGCAAGTACAGAGAGTTGAAGAGAAGCCTGCCTCCTATAAAACGACCTATTACGGCCACCACACTTGCAAAAACACAGATGAAATTATATTTGAACCTACTACTCCTCCTTCTCACACTAATTCTTCCTCCGTGTTCCTTAGTTTTAACAACGCATACCCAACTCCAAACAAACAAGATTGTCCCTTTTTATCGTCACATCATTTAGTGTTGGATTGTAAGGAGGAGGAAGTAGTAATTCCCTCACCCTCCGAGGATGAATTACTGTCCTCCCCTTTAGATAGTACTAGTACCTTATCATCATCGACTAAACTTGAATCCGATGATGATGATCATAAGGATATGATGATGATGATGTATGGTCTCTTGTATGATTCTGTTGATCAGCTTGACCATCATGATCGTTCCTTTCATCCTTTTCTTGGCCTTTTATAG 936 0.391 MEIKLEKEEGYYILEMDEAMEELVRGREYANKLGQVLLLAVNHDDDELAMAATPLLFAQHLLNNILNSFTNTLILLKKNHQMQLKRDFSFITPTKSHEDNSQDTSTLAGRGSYKRRKTTETWEKISESPIDDGHQWRKYGQKTILNSKYSRDYYRCTHKLDQRCEATKQVQRVEEKPASYKTTYYGHHTCKNTDEIIFEPTTPPSHTNSSSVFLSFNNAYPTPNKQDCPFLSSHHLVLDCKEEEVVIPSPSEDELLSSPLDSTSTLSSSTKLESDDDDHKDMMMMMYGLLYDSVDQLDHHDRSFHPFLGLL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3399 311 MobiDBLite consensus disorder prediction 248 277 - -
Tpr5g3399 311 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3399 311 MobiDBLite consensus disorder prediction 255 270 - -
Tpr5g3399 311 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 16 300 - -
Tpr5g3399 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 300 IPR044810 GO:0003700
Tpr5g3399 311 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3399 311 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3399 311 Gene3D WRKY domain 116 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g3399 311 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3399 Tpr-Chr5 56908559 56910546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3399 18 207 WRKY Transcription Factor Family AT3G56400 33.663 3.04e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g3399 WRKY 9.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3399 - - cam:105852555 266.544