Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3398 ATGGCTGCTGCTTCTTTGCTACATCCAACTTCTATCACTACACTTAAACAGCACCATCACCACCGAACATCAACAATCTGTTTCTTTTATCCCTCCTTAAAACCCACCATCATTCCACCATACAATGTTTCTTTCTTAACTAACACTAACCGTTTCAACACAAAGTGTAATGCATTCTTTGATAACAACAATGTGGTCAACAGTTTGTTGGATGTTGGTGGGGACAACTTTCCTACTTTCCTCCGATCATTACTACTTCAGTTTGAAGACTTGTCAGACATGCAGAGATGGGAGTCACTTGTGTTTGGCAGTCTCATATGGATTTACTTAACTGCAAGACCAGGTGTTCTTATTGGTGCCATTGATGCTTACCTTCTTGCTCCTCTTCAACTTGCTTTTGATAATCTATCTGGTAGGAGAAACTTGAAGACTGCTGATTTTCTTGTTGGAAATAAAATCGGTGAAGGCTCCTTTGGTGTTGTTTATTCTGGTGTTTTAGTCCCTAAAAGTGTCATGTTAGATGAAGAGGTCACCAAGAGAGGAAGATCCAAGGTAACAACAACAAGGTTGGATACCAAATCTAAGGATAAAGTCATTCTCAAAAAGGTTAAGATTGGAATTAAAGGGGCTGAAGAATTTGGTGAATTTGAGGAGTGGTTCAATTACAGACTGTCTAGAGCAGCACCTGAAACATGTGCTGAGTTCCTTGGAAGTTTTGTAGCTGATAAAACAAACTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGATCTTACTCTTGACGATTACATCAAAGACCGCAACTTCCCTTCAAACTTAGAATCTGTCATGTTTGGACGTGTGTTGCAAGGTGTCGATTCTTCCAGACGAAATGCATTGATTATCAAGCAAATTATGCGCCAGATAATTACTTCTCTTAAGAAAATTCATGATACAGGCATTGTTCATAGAGATATAAAGCCAGCCAACTTAGTTGTTACTAAAAAGGGGCAGATTAAACTCATTGATTTCGGTGCAGCAACAGACCTTCGGATCGGAAAGAATTATGTTCCCGACCGCACCCTTTTGGATCCAGACTATTGCCCCCCAGAACTATATGTACTCCCAGAAGAAACACCGAGTCCTCCACCAGCACCAATTGCTGCATTCTTTTCTCCAATACTATGGCAGTTAAACAGCCCAGATCTTTTTGATATGTATTCTGCTGGGATTGTACTCCTACAAATGGCAATACCAACCTTAAGGTCTCCAGCTGCTTTGAAGAATTTCAATTTGGAAATAAAAACCTGTGGTTATGATTTAAAAAAATGGAGGGAGTTTACTCGACTCAGGCCCGACTTCCAAATTCTTGACAGTGAATCTGGTAGAGGTTGGGACTTGGCGACAAAGCTTATCTCTGAGAGAGGTCCCTTAAGAAGAGGACGTTTATCTGCTGCTTCAGCTTTGAGACATCCTTATTTTCTTCTTGGAGGTGATCAGGCAGCTGCTGTTCTTTCAAAATTAAGCTCAAGTAGAAAGTGA 1536 0.4043 MAAASLLHPTSITTLKQHHHHRTSTICFFYPSLKPTIIPPYNVSFLTNTNRFNTKCNAFFDNNNVVNSLLDVGGDNFPTFLRSLLLQFEDLSDMQRWESLVFGSLIWIYLTARPGVLIGAIDAYLLAPLQLAFDNLSGRRNLKTADFLVGNKIGEGSFGVVYSGVLVPKSVMLDEEVTKRGRSKVTTTRLDTKSKDKVILKKVKIGIKGAEEFGEFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDLTLDDYIKDRNFPSNLESVMFGRVLQGVDSSRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKKGQIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAALKNFNLEIKTCGYDLKKWREFTRLRPDFQILDSESGRGWDLATKLISERGPLRRGRLSAASALRHPYFLLGGDQAAAVLSKLSSSRK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3398 511 SUPERFAMILY Protein kinase-like (PK-like) 143 493 IPR011009 -
Tpr5g3398 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Tpr5g3398 511 Pfam Protein kinase domain 299 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3398 511 ProSiteProfiles Protein kinase domain profile. 147 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3398 511 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 4 508 IPR044803 GO:0004674|GO:0009579
Tpr5g3398 511 Gene3D Transferase(Phosphotransferase) domain 1 290 494 - -
Tpr5g3398 511 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 4 508 - -
Tpr5g3398 511 Gene3D Phosphorylase Kinase; domain 1 135 259 - -
Tpr5g3398 511 SMART serkin_6 147 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3398 Tpr-Chr5 56898268 56901552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3398 143 348 MAP Kinase Kinase Kinase AT3G13530 26.066 1.61e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Tpr5g3398 Pkinase 8.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3398 - - mtr:MTR_8g005720 765.377