Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3367 ATGTCCTTCAATCAATCAAAAACCGAAAAGAACGACGCCGTTTATCGAAAATCTGGGCGATCGTCTAGCTTTAATCAGCAGAGAGGTCCCTCAGGTGCTTATGGAAGGGGCAGCGGCGGGCCTGCACCGTCACTCTCCTCTAACAAGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATATAGGGTAAACCCTTCCCCAGTGAATTCAACAGACTCAAACAATGCTCCTGCTGGTCGAGGCATACATAATGGTACTCACGTGCAACCACAATTGCATGGAGCATCTGATGGGCCGGTTGCAAAGGCATCTGAATCAACAGCGCAGAGGAGCCCTAAAGTTGTTCCAAATGCACCAACTTCTCAATCTCCCCCTGTTGTGAGCTCTGATACAACCGCTCCTACAAGCCCTGCTAAGGGAGATGCATCAAAGGCGTTCCCTTTTCAGTTTGGATCAATTGTTCCTGGCTTTATGAACGGGGTGGCAATTCCTCCTCGTACAAGCTCAGCTCCTCCTAATTTAGACGAACAGAAGCATGCTCAGGCCCATCATGACTCTGTTAGATCCGCTGTGCCTTCAGTGCCAATACCTCCTGTTCCGAAGCAGCAGCAACCACCTAGGAATGATGCAGGTGTAACTGACAAATCTAATGCCAGGGAGACTCATCTGGGGGCTAAGGCTAAAAAGGATCCTCAGGTGCCAGTTTTGACCCCAGCAAGCCAGACACAGAAGCCTTCTGTTGTTCCCGTAACTGGGATTTCAATGTCAACACCATTTCAGCAGCCACAGGCACCTTTACAGTTTGGTGGTCCTAATCCACAGATTCAATCTCAGGGGATGCCCTCGACACCCCTCCATATTCCTCTACCAATGCCTATACCAATTGGAAATGTTCCACAAGTGCAACAGCCGGTTTTTGTTCCAGGTCTTCAGCATCATCCAATGCACCCTCATGGGATCATGCATTCAGGCCATAACATAAGTTTCACTCATCAAATGGGTCATCAGTTGCCTCATCAATTGGGCAACATGGGCATTGGCATGGGCCCTCAATATCCCCAGCAGCAAGGTGGAAAATTTACTGGTCCTCGAAAAACTACTCCCGTCAAGATAACTCATCCTGATACACATGAAGAACTGAGGCTTGATAAAAGGACAGATGGATATTCAGATGGTGGGTCATCTGGTGCTAGGTCGCATCCTAATGTACCTTCTCAATCTCAACCTGTTAAATCCATTGCCACTTCTCAGCCTACGAATTATTATCCTTCCAGCTCATATGGTTCCAATTCTCCTTATTATCAACCTAATTCTCTTCCATTAACAAGTAGCCAGATAACTCCCAATGCTCAGCCACCAATATTTAATTATCCTGTGAACAATGGTCCACAAAATGTGGCTTTCATGAATTCGCCGTCTCTTAATTCTCAGCCTGTTAATAAAGTCAGCACTCCTATTCCTCGCATTGCTGAACCCCCCACTGTAGAACGTTCTCGTGAAGTACCTAATGTGATATCATCAGCTCCAACGGGGGTGGCTTCTGTGACTATTAAACCAAGCGGTGTGTCGGCTGTTGCGGAGTCATCATTGACTAATTCTAGTATATGTGGTGTTCAAAATAACGAGACTCCCAGTTCAGCAGCATCTTGCGATACTAGCTCCCCTTTACCACAAAAAGGATCTGAAACATTCTCGGAAATCTCTACAGGAAAATCTAAATCTTCTGAGGATTCTTCAGTTTTGAGTTCGTTGCCAAAACAAGCTGCTGCATCTGTTGTCGGTGCCGAGAAGCTTACGATGCCACCTTCTTCAGCAGTCACTGTGGATTCTGTTTCAGTTGTGACTAATAATGAAGCCAGCATGAGGGAACCTATTAGCGGGTCCAACTCTTTAAAGGATAACCAGAAGAAACCTGGGAAACAAGGTCAATCATCTCAAGATCAGGACTCTGTGCAATCTCCTCGAGCGGCAAATGTGACGTCTGGAGCTGTTGAAAGTGGTATATCGGATACTAAGGTTTCCACACCTGTAGGAAGTGAAACAAACCATTCTTCTGCAGATCTTCCCATATCTGAAGGATCTATTGCTAAAGCGGCTGATAGTTTGAGCGATCATAAGCATGATAAGATAGATGAATCATCTGAAGATCTGCAGTCTGCTGATGTACCAGAAACAACAAAGGAAATTAATGACAGTGCAGAGAATGCTTGCAGCGACTCAATGTCTCTTTCAGCGTCAGGTATCAAGGATAGACCAAATTTAGAAGCAAATAAAGCAAAAGTTACATCTAAAGGGAAGAAGAAAAGAAAAGAGATTCTCCAGAAAGCAGATGCTGCCGGGTCAACTTATGATCTTTATAATGCATACAAAGGACCTGAGGAAAAGAAAGAAACTGTGTTAATTTCAGAGAGCACAGAAAATGAATCTACATCTGAAGGTTTAAAGCAGTTATCTCCAGATTCTGCTCAGTTAGATTCTCCTGCAAGTGAGAAATGTGGTCACAATAAAGCCGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACACCAAAACTTGGAGTTGATGTTAAATCTCAGCAGGTTATTGATGGAATTGGAAGTACCGCAAAAAAGTACTCACGCGATTTTCTTTTGAAATTCGCAGAGCAATGCATTACTCTTCCTGAAGGTTTTGAAATTACGGCAGACATTGCTGACCCTTTGATGAGTTTCAATAATTCTCGTGATTCACATCCTAGTCCTGGCAGAACTGACAGGTCAAGGATGGAACGCCGTGTGAATGTTGTGGCTGAGGAAGATAGATGGAATAAAGGTGCCAATGCTTTTCATTCTGGGCGTGGTTTGGATGGTATTGGTAGTAATAGCGGTCGGCACGGTCAAGGAAGAAATTTTGGTGTTTTAAGAAATCCAGGTGGACAGGTATCCCCTCAGATGGCTGGGGGTATCCTTTCTGGACCAATGCAATCTGGGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCTGACGGGGAGAGGTGGCAGCGTTCTACTAGCTTCCAGCAGAGGGGTTTAATTCCCTCACCTCAGTCTCCCTTACAGATGATGCACAGGGCCGAGAAAAAGTATGAAGTAGGTAAAGTCTCAGATGCGGAAGAGGCAAAGCAGAGGCAGCTGAAGGCTATCTTGAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGCTCCCATCTGGCTACTGAGTTGCCTGATTTGAGTGTGGACAATGAAAAGATAACTTTCAAAAGGTTATTATTAAACAAATGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAGGCAAATAAGGCTGATGAGGGTGAGGTGAAGCTATCAAATGAAGAAAGGGAGCTGAGAAGAACCAAGGCAAGAAGGCGCATGTTAGGAAACATAAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCACGAGTGTATCAAGAAGTTACTAGGTCAGTGTCAGGATCCCGACGAGGAAGATGTTGAAGCTTTGTGCAAGCTCATGAGTACTATTGGGGAGATGATTGATCATCCCAAAGCGAAGGAACATATGGATGTATATTTTGAAAGGCTGAGAGTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGTAATTGATTTGAGAAGGAATAGATGGCAGCAAAGGAGAAAAGTCGATGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCTGTGCAAGAGAGGCAGGCTCAAGCTCAAGTTGGTAGGATGGGTCGTGGTATGGGAAACAATCAATCTGCAAGAAGGATGGATTTTGGTGCTAGAGGATCATCTATGTTGTCTCCTCCTGCTCAGATGGGTGGACCGCGTGGGCTGCCTACACAAGCACGGGGATATGGTTTACAGGATGCTCGTTTTGAAGAAAGGCAATCTTATGAGCCTAGGCCCTTGTCAGTTAATTTCCCTCAAAGACCCTTGGGTAATGATTCTATAACATTGGTACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACAGCTTCTCATTTGTCAATACCTGATGTGCATTCTAGCCACGGAGACCCTCACAGAATGGCAGGAGGTATTAATGGTTATAGTAATTCATCTGAGCGCACACCGTACGGCTCAAGGGAGGATCTTGCATCAAGATATATTTCAGACAGATCTTCAAGTCTAGCTGGATATGATCATTCAAGTGCTCCAGGGCATAATATAAACTATGGTAACAGAGACTTAAGGAATGATGATCGGAATCTCGACAGGCCTGTTACAACTCCACCTCACACTCAGTTGCAAGGGCCAATTGTCTCCCAAAATGCTTCTTCAGAGAATGCTTGGCCAGAGGAACAACTACGGAACATGTCCTTGTCAACAATCAGAGAATACTACAGTGCTAGAGATGTAAATGAAGTTGCTCAATGCATCAGAGATTTGAACTCTCCAGCCTTTCACCCTTCCATGGTTTCTGTATGGGTCTTGGACTCATATGAGAGAAAGGACACTGAAAGAGATCTTTTAGCCAAACTGCTTGTCAAACTTGGGAAATCTCAGGATGGCCTATTAAGTCAAACTCAGCTTAACGAAGGGTTCGTGAAAGTTCTCAGTAATTTGGAGGATGATGTTAATGATGCCCCTAAGGCACCAGAGTTTCTTGGCTGTATTTTTGCAGAACTTATAATAGAGAGTATAGTCAGTTTGAATGAGATTGGCCAAGTAATACATGATGGTGGAGACCCGCCAGGCAGTCTCTTAGAAGTTGGACTTGCAGCTGACGTCCTCGGAAGCACCTTGGAGGCAATAAAACATGAGAAAGGCGACACTGTTCTAAGTGAGATTCAAACAGGCTCAAACTTGCGGTTGGAGACTTTCCGACCACCTAATACTTCTACTACATCAAGGAAGTTGGAGAAGTTTATTTAG 5097 0.444 MSFNQSKTEKNDAVYRKSGRSSSFNQQRGPSGAYGRGSGGPAPSLSSNKSFNKKSNNAQGGQYRVNPSPVNSTDSNNAPAGRGIHNGTHVQPQLHGASDGPVAKASESTAQRSPKVVPNAPTSQSPPVVSSDTTAPTSPAKGDASKAFPFQFGSIVPGFMNGVAIPPRTSSAPPNLDEQKHAQAHHDSVRSAVPSVPIPPVPKQQQPPRNDAGVTDKSNARETHLGAKAKKDPQVPVLTPASQTQKPSVVPVTGISMSTPFQQPQAPLQFGGPNPQIQSQGMPSTPLHIPLPMPIPIGNVPQVQQPVFVPGLQHHPMHPHGIMHSGHNISFTHQMGHQLPHQLGNMGIGMGPQYPQQQGGKFTGPRKTTPVKITHPDTHEELRLDKRTDGYSDGGSSGARSHPNVPSQSQPVKSIATSQPTNYYPSSSYGSNSPYYQPNSLPLTSSQITPNAQPPIFNYPVNNGPQNVAFMNSPSLNSQPVNKVSTPIPRIAEPPTVERSREVPNVISSAPTGVASVTIKPSGVSAVAESSLTNSSICGVQNNETPSSAASCDTSSPLPQKGSETFSEISTGKSKSSEDSSVLSSLPKQAAASVVGAEKLTMPPSSAVTVDSVSVVTNNEASMREPISGSNSLKDNQKKPGKQGQSSQDQDSVQSPRAANVTSGAVESGISDTKVSTPVGSETNHSSADLPISEGSIAKAADSLSDHKHDKIDESSEDLQSADVPETTKEINDSAENACSDSMSLSASGIKDRPNLEANKAKVTSKGKKKRKEILQKADAAGSTYDLYNAYKGPEEKKETVLISESTENESTSEGLKQLSPDSAQLDSPASEKCGHNKAEPDDWEDAADMSTPKLGVDVKSQQVIDGIGSTAKKYSRDFLLKFAEQCITLPEGFEITADIADPLMSFNNSRDSHPSPGRTDRSRMERRVNVVAEEDRWNKGANAFHSGRGLDGIGSNSGRHGQGRNFGVLRNPGGQVSPQMAGGILSGPMQSGGNQGGMQRNSPDGERWQRSTSFQQRGLIPSPQSPLQMMHRAEKKYEVGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDLSVDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEERELRRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLRVLSNNMNLSSRVRFMLKDVIDLRRNRWQQRRKVDGPKKIEEVHRDAVQERQAQAQVGRMGRGMGNNQSARRMDFGARGSSMLSPPAQMGGPRGLPTQARGYGLQDARFEERQSYEPRPLSVNFPQRPLGNDSITLVPQGGLARGMSIRGSTASHLSIPDVHSSHGDPHRMAGGINGYSNSSERTPYGSREDLASRYISDRSSSLAGYDHSSAPGHNINYGNRDLRNDDRNLDRPVTTPPHTQLQGPIVSQNASSENAWPEEQLRNMSLSTIREYYSARDVNEVAQCIRDLNSPAFHPSMVSVWVLDSYERKDTERDLLAKLLVKLGKSQDGLLSQTQLNEGFVKVLSNLEDDVNDAPKAPEFLGCIFAELIIESIVSLNEIGQVIHDGGDPPGSLLEVGLAADVLGSTLEAIKHEKGDTVLSEIQTGSNLRLETFRPPNTSTTSRKLEKFI* 1699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 701 718 - -
Tpr5g3367 1698 Pfam MIF4G domain 1051 1272 IPR003890 GO:0003723|GO:0005515
Tpr5g3367 1698 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 115 1687 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 41 82 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 215 229 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 357 429 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 805 827 - -
Tpr5g3367 1698 Gene3D - 1051 1286 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 721 749 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 1450 1464 - -
Tpr5g3367 1698 SMART if4_15 1051 1273 IPR003890 GO:0003723|GO:0005515
Tpr5g3367 1698 Coils Coil 1133 1173 - -
Tpr5g3367 1698 SUPERFAMILY ARM repeat 1503 1695 IPR016024 -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 394 429 - -
Tpr5g3367 1698 Pfam MA3 domain 1515 1623 IPR003891 -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 1484 1504 - -
Tpr5g3367 1698 Gene3D - 1503 1698 - -
Tpr5g3367 1698 SUPERFAMILY ARM repeat 1045 1275 IPR016024 -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 548 584 - -
Tpr5g3367 1698 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 115 1687 IPR045208 GO:0003743
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 17 32 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 619 691 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 372 390 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 619 770 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 104 140 - -
Tpr5g3367 1698 SMART ma3_7 1510 1624 IPR003891 -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 165 249 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 991 1012 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 1 142 - -
Tpr5g3367 1698 ProSiteProfiles MI domain profile. 1509 1633 IPR003891 -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 799 843 - -
Tpr5g3367 1698 MobiDBLite consensus disorder prediction 1450 1471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3367 Tpr-Chr5 56637142 56647024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3367 1 1697 Eukaryotic Initiation Factors Gene Family AT3G60240 44.645 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3367 K03260 - gmx:100798562 2098.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3367 5 56637142 56647024 Tpr5g3367 5 56637142 56647024 ECH