Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3363 ATGTTCCGCCGCGCTACATCTACTTTCCTCTCTCGCGCCGCCGCTACCCGTCGATTCTCCACCGATGTGGCTACCCCTGCCGCCGATTCCGCTTTCGTTGAAGCTTGGAAGAAAGTTAGCCCCAATCTAGACCCACCGAAGACACCTTTCGAATTCCTCAAACCTCGTCCTCCAGTTCCTACTACGCTTCCTACTAAACTCACCGTCAATTTCGTTCTTCCTTATTCTTCTCAATTGGCCGCTAAAGAGGTTGATATGGTTATAGTCCCAGCTACAACTGGCCAGATGGGTGTTCTCCCAGGACATGTCCCAACAATTGCTGAGTTGAAACCTGGGGTCCTGTCTGTACACGAAGGGAATGATACAACCAAGTATTTTGTCAGCAGTGGCTTTGTCTTCATCCATGCAAACTCTGTTGCTGATATTATCGCTGTTGAGGCTGTCCCAGTGGATCAAATTGATGCAAGCCTAGTGCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTCAACTCAGCATCAACTGACTTGGAGAAAGCTGAAGCCCAGATTGGTGTTGATGTGCATAGCGCTCTCAACTCAGCTCTTACAGGCTAA 594 0.4916 MFRRATSTFLSRAAATRRFSTDVATPAADSAFVEAWKKVSPNLDPPKTPFEFLKPRPPVPTTLPTKLTVNFVLPYSSQLAAKEVDMVIVPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDTTKYFVSSGFVFIHANSVADIIAVEAVPVDQIDASLVQKGLQEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3363 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tpr5g3363 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tpr5g3363 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 197 - -
Tpr5g3363 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Tpr5g3363 197 Gene3D - 154 196 - -
Tpr5g3363 197 Coils Coil 162 182 - -
Tpr5g3363 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tpr5g3363 197 Gene3D - 58 153 IPR036771 -
Tpr5g3363 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 78 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tpr5g3363 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3363 Tpr-Chr5 56585837 56588971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3363 1 197 Primary Pumps ATPases AT5G47030 70.244 3.45e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3363 K02134 - gmx:100780778 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3363 5 56585837 56588971 Tpr5g3363 5 56585837 56588971 ECH