Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g3333 | ATGAGTAGAAGATGCCCTCCTGATTGTGAATTTGGCCAATATTTTCCAGCCAATAGGAATGAAGATTTTCAGAAAGCCATTAAGCTTTTTGGATTAAGTCACATATTGAGAATTATGAGATCAGTTGAGCCAAATGAAAGACAAGCTGCTGCTGATTCAATTCTCTTTGAAGGCAGTGTTTGGAGATTTTATCCACAAAGGGGACTGCTTAGATATGAGTTGGATTTGGTTAACACAATATCTTCAACTTTGAGAGAATTACAAATTGCCAATCAACTTTTGGCATTTTTTAAGGATCATGCAAATGAAAGGCCTGCCGGAGATATGAGTGGTATTTCAACTATTCGTGAAAAAGGAGAATCAAGTAATGCATCCAAGCAAAAGGAAGGTGTTGAAGATGGTGAAAAGGGAAAAGGAATTATTATTGAACAAGATGAATCAGAAGACAGTGATGAGGAGGAAGGCCCAAAGAAAAAATGCAGAATTTGA | 489 | 0.3681 | MSRRCPPDCEFGQYFPANRNEDFQKAIKLFGLSHILRIMRSVEPNERQAAADSILFEGSVWRFYPQRGLLRYELDLVNTISSTLRELQIANQLLAFFKDHANERPAGDMSGISTIREKGESSNASKQKEGVEDGEKGKGIIIEQDESEDSDEEEGPKKKCRI* | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g3333 | 162 | ProSiteProfiles | LOB domain profile. | 1 | 94 | IPR004883 | - | |
Tpr5g3333 | 162 | MobiDBLite | consensus disorder prediction | 107 | 162 | - | - | |
Tpr5g3333 | 162 | MobiDBLite | consensus disorder prediction | 121 | 144 | - | - | |
Tpr5g3333 | 162 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 91 | IPR004883 | - | |
Tpr5g3333 | 162 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 2 | 147 | - | - | |
Tpr5g3333 | 162 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 25-LIKE | 2 | 147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g3333 | Tpr-Chr5 | 56297146 | 56297923 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g3333 | 3 | 104 | AS2 family | AT3G13850 | 38.235 | 6.39e-17 | 73.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Tpr5g3333 | LOB | 3e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g3333 | - | - | mtr:MTR_8g009730 | 130.568 |