Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3321 ATGGATCCTCAACTTTTTAATGATAATTGTACTACAAACAATGAGGCTGAAGACCCCTGTATTATAAACTTACCACCTGGTTACAAATTCATCCCTGATGATGTTGACTTAATTGATTATTATTTGAAGTATAAGTTAGCTGGTTTTCTCATAAATCCACCAAGAATTAAAGATGTTGATGTTTACAAATATCCTCCTCATGAACTAGAAAAATACTATAAATTCAAAGGAGAGAAAGAAATGTACTTTTTTACTCGAAGAAGTAAGAAATATGAAGAGGGAAGTCGTCCTAATCGCGATGTTAAAAATCATGACGGTATTCATCTGGGTTTTTGGAAGGCTACCGGAAAAGAAAATTCAGTGATGAATAATAATATTGAAGTTGGATTTAAAAGAACTTTAGTCTATTATGGAGGAAAGCAAGACAAGCCTAAACAAAACAAAGGAAAAGAAGACAAACCTAAGCAAGAAAAGTCTAATGAGTCAATAAAAACCAATTGGAAAACTAATTGGATCATGCAAGAGTATAGAATTAAAGATCTTACAAGTTCAAGCTCAACTTCTCTTAATATGGATGATTGGGTTTTATGCAAAATTTATGAGCATCAATATGGAATGAAGAAATCTCAATTGGAAGGCCAAACCAACAAACAAGTGACAATTTCTACTGGTGTGTATGTTGCTCCACAATGCCAACTCAATCAATGTCATCAAACTCAATGCATGCAATCTTCCTTATCACCAAATATGATTGATAATTCACAATTTCAATTCAATCAACATGATGATAGAGTTAAACAAATGCAAGATGTTTCATCAGAATCTCAAATGGTCTCGAATCAACCTAATCATCAACATTCAGAGTCTCAACCAGTGGAAGTTTCGGTTCCATCAAACACAATTGGTATTACACATTGTCTATCTAATCAATATCAATATGAGAATACTCAACAAATGCAAGCTTCTTCGTCATCAACAATGATGGTTACGCCGCAATATCATTTTAATCAACAACATTATTCTCAGGATCAACAAATGCAAGATTCTTCGAGAGTAGACATAGTCTACGATTCACATATGCCACACCATCAAGCTTATCAACCTTGTGAATCTCAAATGAAAGAATATTATATTGATCCATCGCAATTTATATAA 1155 0.329 MDPQLFNDNCTTNNEAEDPCIINLPPGYKFIPDDVDLIDYYLKYKLAGFLINPPRIKDVDVYKYPPHELEKYYKFKGEKEMYFFTRRSKKYEEGSRPNRDVKNHDGIHLGFWKATGKENSVMNNNIEVGFKRTLVYYGGKQDKPKQNKGKEDKPKQEKSNESIKTNWKTNWIMQEYRIKDLTSSSSTSLNMDDWVLCKIYEHQYGMKKSQLEGQTNKQVTISTGVYVAPQCQLNQCHQTQCMQSSLSPNMIDNSQFQFNQHDDRVKQMQDVSSESQMVSNQPNHQHSESQPVEVSVPSNTIGITHCLSNQYQYENTQQMQASSSSTMMVTPQYHFNQQHYSQDQQMQDSSRVDIVYDSHMPHHQAYQPCESQMKEYYIDPSQFI* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3321 384 MobiDBLite consensus disorder prediction 143 162 - -
Tpr5g3321 384 MobiDBLite consensus disorder prediction 263 291 - -
Tpr5g3321 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 20 360 - -
Tpr5g3321 384 ProSiteProfiles NAC domain profile. 24 202 IPR003441 GO:0003677|GO:0006355
Tpr5g3321 384 MobiDBLite consensus disorder prediction 270 291 - -
Tpr5g3321 384 PANTHER NAC TRANSCRIPTION FACTOR 56 20 360 - -
Tpr5g3321 384 SUPERFAMILY NAC domain 20 200 IPR036093 GO:0003677|GO:0006355
Tpr5g3321 384 Gene3D NAC domain 34 206 IPR036093 GO:0003677|GO:0006355
Tpr5g3321 384 MobiDBLite consensus disorder prediction 141 162 - -
Tpr5g3321 384 Pfam No apical meristem (NAM) protein 25 178 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3321 Tpr-Chr5 56222075 56223970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3321 22 208 NAC Transcription Factor Family AT5G63790 38.743 1.20e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr5g3321 NAM 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3321 - - cam:101498998 197.978