Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3302 ATGGTTCTTCTAAGTAGCTGGATTTTCAATTTTCATGTTTTTGTTACTTTCTTGTTGCTGATTAGTTGTGGAATAACCTACGGGACTGAAACTGATATCTTGTGCTTGAAAAATATAAAAATTTCCATCCAAGACCCGAATAATTTTTTGACATCTTCATGGAATTTCAACAATAATACTGAAGGGTACATTTGTAGCTTTTACGGTGTTGAATGTTGGCATTCTAATGAGAATAGTCTCATGAAACTCGAATTGTCAAATATGGGACTCAAGGGTCAGTTTCCTCGCGGCATTATTAATTGTTCAAGCTTAACAGGATTAGATCTTTCGGGTAACGATCTCTCTGGAACAATTCCAGATGATATATCTACGCTTCTAAGTTTTGTGACAACGCTTGATCTTTCTTCGAACGCATTTTCTGGGGAGATACCTGATAACCTTGCAAATTGTACTTATCTGAATAGCATTAAACTTAATCAGAACCGACTCACCGGTCAAATTCCTCTACGGCTAGGCACTCTCACACGTATTAAGACGTTCGATGTATCCGACAATCTTTTGACCGGACAAATTCCAAACTTCACTGATGGTACAGTTAGTGTAAATTATGCAAATAATCAAGGTCTTTGTGGAGGTTCATTGGGGGTTTGCAAGGCCAATGGTTCATCAAAGAGTAACACCGCGGTTATAGCTGGAGCAGCTGTTGGTGCAGTGACTCTTGCAGCGTTAGGATTGGGCATCGTAATGCTCTTCTTTGTGCACCGTGTTTCTTATAGGAAAAAGGAAGAAGATCCTGAAGGAAACAAATGGACAAAAGGTCTTAAAGGAGCTAAGGCAATTAAGGTATCTCTATTTGAGAAATCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAAGCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAACGCTACTCTTAATGACGGCACAGCATATATGGTGAAACGATTGCAGGAATCTCAACACTCCGAGAAAGAATTCATGTCTGAGATGGAGATGCTAGGGACTGTCAAACATCGTAATCTAGTACCTCTTTTAGGTTTTTGCGTGGCCAAAAAGGAGAGGCTTTTGGTCTTCAAAAACATGCCGAATGGAATGCTCCATGATCGACTACATCCTGCTGCTGGCGAGTGCACCCTTGACTGGCCTTCGAGACTAAAAATTGCAATAGGTGCGGCCAAAGGATTAGCATGGCTTCATCATACATGCAATCCTCGTATCATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTCGAGCCCAAAATTTCTGATTTCGGCCTTGCCAGATTGATGAATCCACTCGCTACACATTTAAGTACTGTGATAAATGGTGAATTCGGAGATTTTGGTTATGTGGCTCCTGAGTATGCAAAAACATTAGTCGCTACGCCTAAGGGCGATGTTTTCAGTTTTGGGACAATGCTTCTTGAGTTGGTGACGGGCGAAAGCCCTGCAAATGTGGCGCTCCAAACTTTTAAAGGAAATCTCGTGGAATGGATTGCAGAGCTTACAAACAACTCGGAACTCCACAATGCCATTGACGAATCACTAGTTGACAAGAGCAACGATAATGAGCTCTTCCAATTTTTAAAGGTTGCATGCAACTGTGTCTCACCATCTCCAAAGGAGAGGCCAACAATGTCTGAAGTGTATCAGTTATTAAGAGCTATTGGTGGTAAGTACAATTTCACAACTGAGGATGAAATATTGGTAACTGAAGATATTGGTGATAATAATAACATGGAGGAACTTATTGTTGCTAGAGAAGGAAATAATTGA 1845 0.4038 MVLLSSWIFNFHVFVTFLLLISCGITYGTETDILCLKNIKISIQDPNNFLTSSWNFNNNTEGYICSFYGVECWHSNENSLMKLELSNMGLKGQFPRGIINCSSLTGLDLSGNDLSGTIPDDISTLLSFVTTLDLSSNAFSGEIPDNLANCTYLNSIKLNQNRLTGQIPLRLGTLTRIKTFDVSDNLLTGQIPNFTDGTVSVNYANNQGLCGGSLGVCKANGSSKSNTAVIAGAAVGAVTLAALGLGIVMLFFVHRVSYRKKEEDPEGNKWTKGLKGAKAIKVSLFEKSVSKMKLSDLMKATNNFSKSNIIGTGRTGTVYNATLNDGTAYMVKRLQESQHSEKEFMSEMEMLGTVKHRNLVPLLGFCVAKKERLLVFKNMPNGMLHDRLHPAAGECTLDWPSRLKIAIGAAKGLAWLHHTCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPLATHLSTVINGEFGDFGYVAPEYAKTLVATPKGDVFSFGTMLLELVTGESPANVALQTFKGNLVEWIAELTNNSELHNAIDESLVDKSNDNELFQFLKVACNCVSPSPKERPTMSEVYQLLRAIGGKYNFTTEDEILVTEDIGDNNNMEELIVAREGNN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3302 614 SUPERFAMILY L domain-like 31 201 - -
Tpr5g3302 614 PANTHER RECEPTOR-LIKE PROTEIN 55 5 591 - -
Tpr5g3302 614 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Tpr5g3302 614 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Tpr5g3302 614 Gene3D Phosphorylase Kinase; domain 1 266 377 - -
Tpr5g3302 614 ProSiteProfiles Protein kinase domain profile. 304 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3302 614 CDD STKc_IRAK 310 576 - -
Tpr5g3302 614 PANTHER LRR RECEPTOR-LIKE KINASE 5 591 - -
Tpr5g3302 614 Gene3D Ribonuclease Inhibitor 29 217 IPR032675 -
Tpr5g3302 614 Gene3D Transferase(Phosphotransferase) domain 1 379 599 - -
Tpr5g3302 614 SUPERFAMILY Protein kinase-like (PK-like) 284 576 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3302 Tpr-Chr5 56093115 56095600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3302 14 590 Receptor kinase-like Gene Family AT3G28450 44.768 2.40e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tpr5g3302 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3302 - - gmx:100817267 880.167