Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3299 ATGATAAAATCAGATATCATTGGAAGAGAAGATGATAAAAGGAAGATTATAAGCTTGTTGCGACAACCACATGAAATTCAAAATGTCTCTTTGGTTGCTATTGTTGGGATTGGTGGTTTGGGAATGACAACTCTTGCTCAATTGGTATACAATGATGGTGAAATAAAAAAGTCTTTTGAAAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTGTGAAGAACATGTTGGAGTCACTAACCAAGAAAAAAATTGATGATACATTATCATTGGACACCTTGCAAAATATGCTTGGTGGAAATTTATCCAGTAAGAGATACTTGTTAGTCCTAGATGACATTTGGAACGATAGTTTTGAAAAGTGGGATAAATTGTGGACTTGCTTGATGTGTGGTGCTCAAGGAAGTAAGGTTATAGTGACTACTCGTAGTAGAACTGTGGCTCAAACCACGGGTGTATGTGTCCCCTATGCTTTGAATGGTTTGATTCTAGAAGACTCTTGGAGTTTATCAAAGAATATTGCATTTAGGGATGATACCACTGGAGTGAATCGAACTCTCGAATCAACCGGCAAGAAGATAGCAGAAAAGTGCAGAGGCGTTCCATTAGCAATTAGATCATTGGGAGGCATATTAAAGAATAAAAGAGAAGAAAATGAATGGGGTCATGTCTTGCGAGGTGACTTTTGGAAATTGTGCGAGGAAAAAGATAGCATCATGCCGGTCCTAAAATTGAGTTACCGAAACTTGTCACCTCAACAAAAACAGTGTTTTTCTTATTGCTCTTTATATCCTAATGATTGGGAATTTAAGAAGGGTGAGTTGATTCAAATGTGGATGACACATGGTTATCTTGAATGTTCAGTCGAAGGGCAATGCATGGAAGATGTTGGTAACCAATTTGTTAATATTTTCTTGATGAAATCATTCTTCCAAGATGCAAAATTGAATGAAGATGGTGATATAAACTGTTTTAAAATGCACGATTTAATGCACGATCTTGCAACACAAATAGCTGGAAATGATTGTTGTTACTCTAATTTATACTTGCAATTTTTTTATTCACTTATTTAG 1086 0.3573 MIKSDIIGREDDKRKIISLLRQPHEIQNVSLVAIVGIGGLGMTTLAQLVYNDGEIKKSFEKSMWVCVSDNFDVKTIVKNMLESLTKKKIDDTLSLDTLQNMLGGNLSSKRYLLVLDDIWNDSFEKWDKLWTCLMCGAQGSKVIVTTRSRTVAQTTGVCVPYALNGLILEDSWSLSKNIAFRDDTTGVNRTLESTGKKIAEKCRGVPLAIRSLGGILKNKREENEWGHVLRGDFWKLCEEKDSIMPVLKLSYRNLSPQQKQCFSYCSLYPNDWEFKKGELIQMWMTHGYLECSVEGQCMEDVGNQFVNIFLMKSFFQDAKLNEDGDINCFKMHDLMHDLATQIAGNDCCYSNLYLQFFYSLI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3299 361 PANTHER DISEASE RESISTANCE PROTEIN RP 6 349 IPR044974 GO:0006952
Tpr5g3299 361 Gene3D - 2 158 IPR027417 -
Tpr5g3299 361 Pfam NB-ARC domain 9 252 IPR002182 GO:0043531
Tpr5g3299 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 265 IPR027417 -
Tpr5g3299 361 Gene3D - 251 342 IPR036388 -
Tpr5g3299 361 PRINTS Disease resistance protein signature 31 46 - -
Tpr5g3299 361 PRINTS Disease resistance protein signature 105 119 - -
Tpr5g3299 361 PRINTS Disease resistance protein signature 202 216 - -
Tpr5g3299 361 Gene3D - 166 250 IPR042197 -
Tpr5g3299 361 PANTHER OS05G0414200 PROTEIN 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3299 Tpr-Chr5 56016948 56018033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3299 21 342 WRKY Transcription Factor Family AT5G45050 23.099 5.18e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3299 - - mtr:MTR_8g027540 560.451