Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3294 ATGGATGAAGATCAAGAGATGGAGAAATTCGGAATGGAGAATGATTTCGAAGGTGGCGAATGGGTTGGTGGTGAATTCTACTATCGAAAGCGTAGAGAGAAACGACATCAAACCAAAGAGGATGTTCTCTATGGAGTTTTTGCTGATTCTGAAGATGACGATGATGATGAGTATTCTAGTAGGAAGCGAAGAAAAGACCGTGATTTTTCGAAGAAACAGGACTTCACTAAACCGGTGAATTTCGTTTCCAGTGGAAATTTTATGCCTAATCAAGATAATGTTAATGAGAATTTGAAAGAAAAAGATGAGAATGATAGTTATGTTGACGAAGATAGGCCTGGTTTAGGTGCAGGTCTTGGTTTTGGATCTGCTAGCACGTCCGGGTCTGGTTTAGGTTTTAATTCTGGTCCTGTGAATGGTTCTCATAGGAATGATGAATCTGATGATAATGATAACGGTGATGATAAGTTTTTGCCTACTGCGTTTGGGAAGAAGATTAAGGAGGGAGCAATGAGGAGGGAGAAGGAGAGATTGGAGAAGAAGAAGGGGCAGAAGCAGAAGCCTGGTCTAGGTCTGGGGGGATCTGTGGATGTTGGGACTTTCGAGACTCATACAAAAGGAATTGGAATGAAGCTGCTGGCGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATCAGCAGGGTATTTTGAATCCTATTGAGGCAACATTAAGGGCTAAGAATAAAGGTCTTGGATTTGATTCATCAGAGAAGACTACAATGCCGTTGCCCACTTTGCAGACGGAAAAGAAGAATACATCGGGAGGAGATGTGCAGCCTACAGTTGGAAGATCGAGAGAACGTTCGTGGTTAAAGCAGTTGAAGAAGAAGAAAAAAGAAGAGTATGTAACTGCTGAAGAGTTGTTGGCGAGCAAGCAAGAAGAAGATTCAGAGGTTGTTCAGAAGATTTATGATATGCGGGGCCCGCAGGTACGAGTGTATACAAATTTGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAGAGGATGTCCCAATGCCCGAGCTTCAGCATAACGTAGCACTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATAGATAGTGATTTGAGGAAAGAGAGGGATATAGCACTTAGCTTGAAAAAAGAAAAAGAGAACTTGGAAGCTGAGGCATCATTTCAAAAGAATCAGCTGGATAATTATGAGAAAATAATGAGTGTGCTAGACCGAGTTGGAGAAGACAACACCTTAGGAACATTAACATTGGACTCCCTTGCTCAATGCTTTAGAGACATGCACAAAAGATATCCTGACGACTATAAGTTGTGTAACTTGTCATGCATTGCTTGTTCATATGCTCTTCCTTTGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCTTCTCATGGTTTGGAGTTGGTATCACAGTGGAAGGCATTGCTTCAAGGTGATGATTGTTTTGATATTTGGGACACATCGTCACCTTATACTCACTTGGTTTCAGAGGTTGTATTATCAGCTGTTAGAATATCTGGTATAAATACATGGCCTGCACGGGATCCTGAGCCGATGCTAAGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCGCTGATATATTAGACAACATAGTCATGCCAAAACTATCAAATGCAGTAGGTACTTGGGAACCACATCTTGAGACCATTCCTATCCACACATGGGTGCATCCATGGCTACCTTTGCTAGGGCACAAATTGGAGGAGATCTACCGGACGATTCGTTTCAAATTGAGTACTGTTCTTGATGCGTGGCATCCAAGTGATGGTTCTGCATATGCCATATTGTCCCCTTGGAAGACTGTATTTGATAAGGATAGTTGGCAACAACTTATGCACCGTTTTATTGTACCAAAGCTGAAGGCTGTATTTGTATCTGATGAATTTCAAGTGAACCCGGCAAGTCAGAAACTTGATCAGTTTTATTGGGTAATGAACTGGGCTTCAGCTATCCCAGCTCATCTGATGGTTGACACGATGGAAATCTTCTTTACCAAGTGGCTTACAGTTTTGTATCGTTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTACGAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATGAAACTATTCGATACAAGATCAATTGCGGTCTTGAAATGTTGAACCAGGCTGTTGAAGGTATGGAGGTTGTGCAACCTGGTTTGAAGGAGAAGATAAGCTATATCAGGGTAAGTGAGCAGAGGAAATTTGAGAATCAGCAGAAAGCAGCGGCCTCTGCTCAGCCTGTCAATGCAGATGGTGTGAATGAAATGAGCATGAAAGAAATCATTGAAACCTATGCTCGGGAGCATGGTTTACTGTTCAAACTTAAACCTGGTAGAATGCATAATGGCCATCAAATATATGGGTTTGGCAATGTCAGCATAATAATTGATTCTCTAAATCAAAAGGTCTATGCCCAAAATGAGGAGACATGGTCTTTAGAAACTCTTGCGCGATTGCTAGAGTTACATAATAGATCTCTTAGTAAAAGACGCTGA 2589 0.416 MDEDQEMEKFGMENDFEGGEWVGGEFYYRKRREKRHQTKEDVLYGVFADSEDDDDDEYSSRKRRKDRDFSKKQDFTKPVNFVSSGNFMPNQDNVNENLKEKDENDSYVDEDRPGLGAGLGFGSASTSGSGLGFNSGPVNGSHRNDESDDNDNGDDKFLPTAFGKKIKEGAMRREKERLEKKKGQKQKPGLGLGGSVDVGTFETHTKGIGMKLLAKMGYKGGGLGKNQQGILNPIEATLRAKNKGLGFDSSEKTTMPLPTLQTEKKNTSGGDVQPTVGRSRERSWLKQLKKKKKEEYVTAEELLASKQEEDSEVVQKIYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNVALIVRLAEADIQEIDSDLRKERDIALSLKKEKENLEAEASFQKNQLDNYEKIMSVLDRVGEDNTLGTLTLDSLAQCFRDMHKRYPDDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLQGDDCFDIWDTSSPYTHLVSEVVLSAVRISGINTWPARDPEPMLRFLESWEKLLPSSVLADILDNIVMPKLSNAVGTWEPHLETIPIHTWVHPWLPLLGHKLEEIYRTIRFKLSTVLDAWHPSDGSAYAILSPWKTVFDKDSWQQLMHRFIVPKLKAVFVSDEFQVNPASQKLDQFYWVMNWASAIPAHLMVDTMEIFFTKWLTVLYRWLCSNPNFEEVTKWYLGWKELIPKELLANETIRYKINCGLEMLNQAVEGMEVVQPGLKEKISYIRVSEQRKFENQQKAAASAQPVNADGVNEMSMKEIIETYAREHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLETLARLLELHNRSLSKRR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3294 862 MobiDBLite consensus disorder prediction 142 186 - -
Tpr5g3294 862 ProSiteProfiles G-patch domain profile. 205 250 IPR000467 GO:0003676
Tpr5g3294 862 SMART G-patch_5 203 248 IPR000467 GO:0003676
Tpr5g3294 862 Pfam Tuftelin interacting protein N terminal 4 108 IPR022159 -
Tpr5g3294 862 Coils Coil 372 406 - -
Tpr5g3294 862 MobiDBLite consensus disorder prediction 39 188 - -
Tpr5g3294 862 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 849 - -
Tpr5g3294 862 PIRSF TFIP11 1 857 IPR024933 -
Tpr5g3294 862 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 849 IPR045211 GO:0000390
Tpr5g3294 862 Pfam G-patch domain 205 246 IPR000467 GO:0003676
Tpr5g3294 862 Coils Coil 289 309 - -
Tpr5g3294 862 Pfam GC-rich sequence DNA-binding factor-like protein 424 692 IPR022783 -
Tpr5g3294 862 MobiDBLite consensus disorder prediction 122 141 - -
Tpr5g3294 862 MobiDBLite consensus disorder prediction 76 94 - -
Tpr5g3294 862 MobiDBLite consensus disorder prediction 56 74 - -
Tpr5g3294 862 MobiDBLite consensus disorder prediction 95 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3294 Tpr-Chr5 55935147 55941548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3294 194 246 C2H2 Transcription Factor Family AT5G26610 45.283 5.81e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3294 K13103 - gmx:100781621 1252.27