Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3274 ATGGAACAAGGAGAAGGTAGTAGTAGTTTGCAACAAGCTGTTAATCAAGGAGGACGTAAGCGAGGAGTTCTCTATTTCACCATTCTCATTCTTCACTCGATTTTTAGAGTTTTAGAGTTAGAGTTTGTTGCTTTTTTAATTGCAATTTACTTCTATTTGTTTTCTATTTGTTCCTTATTTTTTTTTATTTGGCTTAGAAAGATCAATGATTATGGATGGGACACTGCTGGATTATCTGCTGACCCAGAGGCATTTGCCAAGAACAGGGCTCTTGAGGTGATTCATGGAAGATGGGCTATGCTAGGAGCACTAGGATGCATCACACCAGAAGTACTTGAAAAATGGGTGAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAAATATTCTCAGAAGGTGGACTTGACTACTTAGGAAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCATGGTATGCTATTTAG 477 0.3878 MEQGEGSSSLQQAVNQGGRKRGVLYFTILILHSIFRVLELEFVAFLIAIYFYLFSICSLFFFIWLRKINDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAWYAI* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3274 158 Pfam Chlorophyll A-B binding protein 68 140 IPR022796 -
Tpr5g3274 158 Gene3D Chlorophyll a/b binding protein domain 66 158 - -
Tpr5g3274 158 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 69 155 IPR001344 GO:0009765|GO:0016020
Tpr5g3274 158 SUPERFAMILY Chlorophyll a-b binding protein 68 157 - -
Tpr5g3274 158 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 69 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3274 Tpr-Chr5 55687245 55688402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3274 70 158 Chloroplast and Mitochondria Gene Families AT2G05070 80.899 2.40e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3274 K08914 - zju:107430393 180.259