Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3273 ATGGCTGAACAAATTCCATATGGCCTTGCTGAAGGCCTCATTAAAAGGCTGGCTTCTGCAGCCTTTCATGAAATTGGACGGATTTATGGTGTAAGGGATGAACTAGAAAGGCTTAAAAATACAGTTGAATCCATCAAAGCTGTGCTCCTTGATGCTGAGGAGAAGCAAGAACAAAACCATGCTGTTCAAAATTGGATTACAAGACTCAATGACGTGCTTCATCCTGCCAATGACTTGCTAGATGAATTTTTTATTGAAGATATGAGACAGAAAATCAAACAACATAAGAATAACAAAGTGTCAAAGGTACTGCATTCCTTATCTCCAAATAGAATTGCTTTTCGCTGTAAAATGGCTCATGAGATTGAAAAAATAAGAAAAAGTTTTAATGATGTAGTGGACGAAATGTATAAGTTGAATTTGAGCCAAAATGTTGTGGTGGTTAAGCAATGTGACAATATAAGGAGAGAAACTGGTTCTTTTGTATTAGAATCAGATATCATTGGTAGAGAAGATAATAAAAAAGAGATAATAAATTTGTTGAGGAAACCACATAGAGACCACAATGTATCCTTGATTGCTATTGCCGGTATTGGCGGTTTAGGCAAGACAGCTCTTGCTCAACTGGTATATAATGATGAGGAAGTGCAAAAGTTTTTTGAAAAGAAGATGTGGGTATGTGTCTCTGAAAACTTCGATGTCAAAACTATTTTGAAGAACATATTAGAGTCATTATTAAATGGAAAAGTTGATGAAAACTTATCATTAGACAATTTGCAAAATAACCTCCGTGAAAATTTATCTGAAAGAAAATACTTGTTAGTCCTAGATGACATTTGGAATGAAAGTCATCAAAAATGGATTGATTTGAGAACTTACTTAATGTGTGGTGCTAAAGACAGTAAGATTTTAGTGACGACTTGTAGTAAAACTGTGGCACATACAATGGGTGTAGGTGACCCCTATGTTTTGAATGGTTTGACTCCAGAAGAATCATGGGGTTTGTTAAAGAGCATCATTACATATGGGAATGAGGCCGAAGGAGTGAACCAAACTCTTGAATCAATTGGTAAGAAGATAGCAGAAAAATGTAGTGGAGTTCCACTAGCTATCAGAACACTAGGAGGCCTGTTACAAAGTAAAAGTGAAGAGAGTGAATGGAACAATGTTTTACAAGGTGACTTTTGGAGATTATGCAAAGACGAAAATAGCATCATGCCGGTTCTGAAACTGAGTTACCAAAATTTGTCGCCTCAGCAACGACAGTGTTTTGCATACTGCTCAGTATATCCTAAGGATTGGGAAGTGCTGAAAGATGAGTGGATTCAGATGTGCATGGCACAAGGTTATCTCGAGTGTTCACCTGAAACTAAGGTCATCGAAGATGTTGGTAACAAATTCGTGAAGATTTTCTTGACAAAGTCATTTTTCCAAGACGCGAGAATGGATGAAGATGGTGATATATATAGTTTCAAAATGCATGATTTAATGCATGATCTCGCAATGCAAGTTGCTGGCAAAAATTGTTGTTTCTTAGATGGCGAGGTGAAAGAACCAGTAGGAAGGCCTGTGCATGTATCTTTTCAACGCAATGCCATTGGTTTGTTGGAATCTTTGGATGCAAGCAGGTTGAGAACTTTGGTTTTGTTGTCCTCGTGTCCCCAGTGGACAGGATTGGATGGGGAGGAATCGTCGGTTGTTTCAAATTTCAAATACTTGCGCGTCTTGAATCTGTCAGATTCTTCTTTAACCAAGCTATCTGGTTCAATTGGAAAGTTAAAGCATTTAAAATGCCTTAACTTATATGATTGCAGGGCTTCAATAGATATTTTCAAAGCCATAAGCAACCTTGTTTGCCTAAAAACATTGAAACTGCAATTGCGTGAAACCACTCCTTGGGAATTTAAAGCATATAGGATTAATAATTCAAAATGGCTTTCTTCACTAACAAATATTGTTCAAATCTCTATCACTTATTGTGGAACTTTGCGGTTTCTCCCCCCGCTGGAACGTCTCCCATTCCTTAAATCTCTTCATATAAGTCACCTAGGTTTTCTAGAATACATACATTATGAAAAACCTATTTTGTCTGAAAAATTCTTCCCATCATTGGAGATCCTCAGGTTGGAGTATTGCCGACAGTTAAAGGGATGGTGTAGGATAGGAGGTTATATTCACTCTTCGCAATCACATCATCCATCCTTCCCTCCCTTTCCTCTTCTATCTCAACTATCAATCACAGGATGTAAGAACTTGATTCGCATGTCTACTTTCCCAAAACTTAAGAGATTGGAGTTAAATGGTAGTCCAGTGGAGGCATTGAATTCAACACTAAACAATCAGAGTCCCTCATTGCCTCCTCTTTCACTGCTCAAATCCCTGTGTATTGGCGGACACGAACTTTATGTCTATAGCATCCCAGTAAATTGGATGCAAAATCTTACATCTCTCAAACACCTTCAAATTGAATACTTTTCAAGGCTACAGTTTCAGAAAATTGCTAGTTGGTTTAATGACAGCTTCAACTATCTTCCTTCTCTACAAAAAATCACCTTACAACATTGTGATGACCTAACGGAACTGCCTGACTGGATATGTAGCCTCTCACCGCTTCAACATGTGACCATAAGGTATTTCCCACATTTAGCATCTGTGCCTGAAGGAATGTATCGTCTTACCAAATTACAGACCCTAGAAATCGTTGGATGTCCCCTGTTAGTAAAAGAATGTGAGATGCAAGCAAGTGCAACTTGGGCCAAAATTGCTCACATCCCCAACATAATCTTAAAGGACTACATTTAG 2802 0.3794 MAEQIPYGLAEGLIKRLASAAFHEIGRIYGVRDELERLKNTVESIKAVLLDAEEKQEQNHAVQNWITRLNDVLHPANDLLDEFFIEDMRQKIKQHKNNKVSKVLHSLSPNRIAFRCKMAHEIEKIRKSFNDVVDEMYKLNLSQNVVVVKQCDNIRRETGSFVLESDIIGREDNKKEIINLLRKPHRDHNVSLIAIAGIGGLGKTALAQLVYNDEEVQKFFEKKMWVCVSENFDVKTILKNILESLLNGKVDENLSLDNLQNNLRENLSERKYLLVLDDIWNESHQKWIDLRTYLMCGAKDSKILVTTCSKTVAHTMGVGDPYVLNGLTPEESWGLLKSIITYGNEAEGVNQTLESIGKKIAEKCSGVPLAIRTLGGLLQSKSEESEWNNVLQGDFWRLCKDENSIMPVLKLSYQNLSPQQRQCFAYCSVYPKDWEVLKDEWIQMCMAQGYLECSPETKVIEDVGNKFVKIFLTKSFFQDARMDEDGDIYSFKMHDLMHDLAMQVAGKNCCFLDGEVKEPVGRPVHVSFQRNAIGLLESLDASRLRTLVLLSSCPQWTGLDGEESSVVSNFKYLRVLNLSDSSLTKLSGSIGKLKHLKCLNLYDCRASIDIFKAISNLVCLKTLKLQLRETTPWEFKAYRINNSKWLSSLTNIVQISITYCGTLRFLPPLERLPFLKSLHISHLGFLEYIHYEKPILSEKFFPSLEILRLEYCRQLKGWCRIGGYIHSSQSHHPSFPPFPLLSQLSITGCKNLIRMSTFPKLKRLELNGSPVEALNSTLNNQSPSLPPLSLLKSLCIGGHELYVYSIPVNWMQNLTSLKHLQIEYFSRLQFQKIASWFNDSFNYLPSLQKITLQHCDDLTELPDWICSLSPLQHVTIRYFPHLASVPEGMYRLTKLQTLEIVGCPLLVKECEMQASATWAKIAHIPNIILKDYI* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3273 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 427 IPR027417 -
Tpr5g3273 933 PANTHER OS05G0414200 PROTEIN 633 907 - -
Tpr5g3273 933 PANTHER OS05G0414200 PROTEIN 33 627 - -
Tpr5g3273 933 Pfam Rx N-terminal domain 13 97 IPR041118 -
Tpr5g3273 933 Gene3D Ribonuclease Inhibitor 756 919 IPR032675 -
Tpr5g3273 933 Gene3D Ribonuclease Inhibitor 530 755 IPR032675 -
Tpr5g3273 933 Gene3D - 11 123 - -
Tpr5g3273 933 PRINTS Disease resistance protein signature 192 207 - -
Tpr5g3273 933 PRINTS Disease resistance protein signature 266 280 - -
Tpr5g3273 933 PRINTS Disease resistance protein signature 364 378 - -
Tpr5g3273 933 PRINTS Disease resistance protein signature 842 858 - -
Tpr5g3273 933 Gene3D - 326 412 IPR042197 -
Tpr5g3273 933 SUPERFAMILY L domain-like 477 922 - -
Tpr5g3273 933 CDD RX-CC_like 23 127 IPR038005 -
Tpr5g3273 933 Coils Coil 35 55 - -
Tpr5g3273 933 Gene3D - 413 504 IPR036388 -
Tpr5g3273 933 Pfam NB-ARC domain 170 415 IPR002182 GO:0043531
Tpr5g3273 933 Gene3D - 149 318 IPR027417 -
Tpr5g3273 933 PANTHER DISEASE RESISTANCE PROTEIN RP 633 907 IPR044974 GO:0006952
Tpr5g3273 933 PANTHER DISEASE RESISTANCE PROTEIN RP 33 627 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3273 Tpr-Chr5 55679782 55683580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3273 189 424 WRKY Transcription Factor Family AT5G45050 25.296 6.44e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3273 - - mtr:MTR_8g027540 1048.88