Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3269 ATGGCTGAATTTGCTTCAAGCCTCATTCAAAGCTTGGGATCTGCTGCCTTACATGAATTTGCACGGATTAATGGTCTTAAGGATGAGTTGGAAAGGCTTAAGGAGCATGTTGAAACTTGTAAAGCCGTGCTGCTTGACCTTGACGGGAAACAAGAGCAAAGTCATGCTGAACAAAACTTAGTAACAAGGCTCAAAGATGTGCTTATTCCTGCAGATAACTTGCTAGATGAATTTGCTATTCAAGATATGATAAACAAAAGGGATCGAAACAAACTAAAAAAGGTACTTCATCCTTACTCTCTAAAAAAATTAGACATGGCTCATGAGATTGAAAAAATACAAAAAAAATTTGATGATGTGCTGAAAATTATGCCTGGATTGAATCTAAACCTAAATGTTAGTGCGGTTGAGAAAACTAACAGTGAATGGAGGGAAACTGGTTCTTATGTGCAAGAATCAGAAATAATTGGAAGAGATGATGACAAAGAGAATATTATAAGCTTGTTGAGACAGTCACATGGAGATCCAAATGTCTCTTTCGTTGCTGTTGTTGGGATTGGTGGTATGGGAAAGACAACTCTTGCTCAGTTGGTGTATAGTGACGAAAAAGTGCAAAATTTGTTTGAAAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTTTGAAGAACATGTTGAAGTCATTATTACCTAAGGAAAAAATTGATGATACATTAACATTGGACAACTTGCAAAGTATGCTTCGTGACAATTTAAATGGTAAGAGATACTTGTTAGTCCTAGATGACATTTGGAACGATAGTTTTGAAAAGTGGGATAAATTGATGAGGACTTATTTGATGTGTGGTGCTCAAGGTAGTAAGGTTGTAGTGACAACTCGGGATACAAGTGTGGCACATAGAATGGGTGTAAAGGATCCATATGTTTTGAGTCATTTGATTCCAGAAAAATCTTGGAGTTTATTAAAGAAGATTGCATTTGAGGATGACACCATTCGAGTGGATCAAAAAATTGAATCAGTTGGTAAGGAGATAGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATAAGATCATTGGGAAGTATATTAAAGAATAAAAGTGAAGAAAAGGAATGGAATGATGTCTTACGAGGTGATTTTTGGAAATTGTGTGAGGATAAAGATAGCATATTGCCAGTTCTAAAATTGAGTTACAATAACTTATCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTGTTTCCTAAGGATTGGGAATTCGAGAAGGATGAGTTGGTTCAAATGTGGATGGCACATGGTTATCTTGATTGTCCAGTGGAAGGGAAATGCATTGAAGATGTTGGTAATCAATTCGTTAATATTTTTTTAATGAAATCATTCTTCCAAGAACCAAAATGGAATGAATATGGTGATTTAATTGGTTTTAAAATGCACGATTTAATGCATGATCTTGCAAAACAAGTAGCTGGTGATGATTGTTGTTACTTGGATAATAACGCAAAAGGATTTCGAGGAAGACCTGTCCATGTATGGGTTGAATTTGACGCATTTTATTTGCTGGAATCTTTGGATGCTAGTAGGCTGCGAACTTTGATTGTGCTTTCTTCTAATGATGGTGATTTATTGGATAGAGAGAAACAATCACTTATTTCAAGGTTCAAATACTTGCGTGTCTTGAAGTTTTGCAATAATCTTTATCTTGAGCTATATGTTTCAATTGAAAAATTGAATCATTTAAGATTTCTTAAATTACCTTTGGATCGTAAGCTAGAAAAGTTTCACAAGTCCATAAGAAATCTTGTTTGTTTACAAACCATACAAGTGAGTTTGGATCCAAAAATTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAACTTGAGATACCTTTATATTAGGCATTGGACCTTCAGAGACAAGACACCAGTTGGATTTGGAAAATTGTGCATACCACAACATGTGGGTGTAAATTTTTCCAAATGGCTTTCTCCTCTCGCAAATATTATTGAAATATATCTTGGTTTTTGTCAAGGTTTCAAATATCTCCCACCTTTGGAAGGTCTTCCTTTCCTCAAGTCACTTTACTTAAATAACCTTCATGATTTGGAGTACATATATTACGAATTGCCTATCCATGAGCCATTCTTCCCATCTTTGAAGAGACTACATATTCGGATGTGTCCCAAACTAGTGGGATGGAAGAGGAAGGGAGATGATTTCAATGATATTAACACTTCACCACATCATCTTTTCCTGCCTCAATTTCCTTGTCTATCTTTTTTTGAATTTCCTTATTGCCCAATGTTGACTCGTATGCCTACTTGTCCAAACATTAAGAAATTATCATTGCAAGTGGAGTGGACATCGAAAGAAACGCCAAATATAGCAGCGTCACAATGCTCGCTCAGTTGCACTCCTCTTTCCTTGCAAATTAATGTGGATTTGAAAAACGTCTCACAATATTGGTGGCAAAATCTTACTTCTCTCGAGAATCTTCAATTTGCGGTTTTTACCGGTCAACAATTTCAAGCAATTGAAATCTGGTTGTTTAAGGAACACTTCAACTATCTTCCTTCATTGCGAAATATTGAATTTCAAAATTGTTACCGCATAAAGGCATTGCCAGATTGGATATGCAAAATCTCATCACTTCAGCATATCACGATAAGCTATTGCGATCAATTGACATTGCTACCTGAAGGAATGACACGTCTTACCAACTTACATACCTTGAAAATCATTGAATGTCCACTCTTAATTGAAGAATATGAGAAAGAAACAAGTGCAACTCGGGCTACAATTGCACACATCCCAAACATAATCATTAAAAAGTGA 2850 0.3558 MAEFASSLIQSLGSAALHEFARINGLKDELERLKEHVETCKAVLLDLDGKQEQSHAEQNLVTRLKDVLIPADNLLDEFAIQDMINKRDRNKLKKVLHPYSLKKLDMAHEIEKIQKKFDDVLKIMPGLNLNLNVSAVEKTNSEWRETGSYVQESEIIGRDDDKENIISLLRQSHGDPNVSFVAVVGIGGMGKTTLAQLVYSDEKVQNLFEKSMWVCVSDNFDVKTILKNMLKSLLPKEKIDDTLTLDNLQSMLRDNLNGKRYLLVLDDIWNDSFEKWDKLMRTYLMCGAQGSKVVVTTRDTSVAHRMGVKDPYVLSHLIPEKSWSLLKKIAFEDDTIRVDQKIESVGKEIAEKCKGVPLAIRSLGSILKNKSEEKEWNDVLRGDFWKLCEDKDSILPVLKLSYNNLSPQQRQCFAYCSLFPKDWEFEKDELVQMWMAHGYLDCPVEGKCIEDVGNQFVNIFLMKSFFQEPKWNEYGDLIGFKMHDLMHDLAKQVAGDDCCYLDNNAKGFRGRPVHVWVEFDAFYLLESLDASRLRTLIVLSSNDGDLLDREKQSLISRFKYLRVLKFCNNLYLELYVSIEKLNHLRFLKLPLDRKLEKFHKSIRNLVCLQTIQVSLDPKIVLSTKVVSKLINLRYLYIRHWTFRDKTPVGFGKLCIPQHVGVNFSKWLSPLANIIEIYLGFCQGFKYLPPLEGLPFLKSLYLNNLHDLEYIYYELPIHEPFFPSLKRLHIRMCPKLVGWKRKGDDFNDINTSPHHLFLPQFPCLSFFEFPYCPMLTRMPTCPNIKKLSLQVEWTSKETPNIAASQCSLSCTPLSLQINVDLKNVSQYWWQNLTSLENLQFAVFTGQQFQAIEIWLFKEHFNYLPSLRNIEFQNCYRIKALPDWICKISSLQHITISYCDQLTLLPEGMTRLTNLHTLKIIECPLLIEEYEKETSATRATIAHIPNIIIKK* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3269 949 Pfam NB-ARC domain 159 404 IPR002182 GO:0043531
Tpr5g3269 949 Gene3D - 402 493 IPR036388 -
Tpr5g3269 949 Gene3D - 317 401 IPR042197 -
Tpr5g3269 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 416 IPR027417 -
Tpr5g3269 949 CDD RX-CC_like 4 120 IPR038005 -
Tpr5g3269 949 Gene3D Ribonuclease Inhibitor 524 801 IPR032675 -
Tpr5g3269 949 Gene3D - 5 111 - -
Tpr5g3269 949 SUPERFAMILY L domain-like 800 923 - -
Tpr5g3269 949 PRINTS Disease resistance protein signature 180 195 - -
Tpr5g3269 949 PRINTS Disease resistance protein signature 255 269 - -
Tpr5g3269 949 PRINTS Disease resistance protein signature 353 367 - -
Tpr5g3269 949 PRINTS Disease resistance protein signature 884 900 - -
Tpr5g3269 949 Gene3D Ribonuclease Inhibitor 802 936 IPR032675 -
Tpr5g3269 949 Coils Coil 23 43 - -
Tpr5g3269 949 SUPERFAMILY L domain-like 466 838 - -
Tpr5g3269 949 Pfam Rx N-terminal domain 5 88 IPR041118 -
Tpr5g3269 949 Gene3D - 137 310 IPR027417 -
Tpr5g3269 949 PANTHER OS05G0414200 PROTEIN 31 779 - -
Tpr5g3269 949 PANTHER DISEASE RESISTANCE PROTEIN RP 31 779 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3269 Tpr-Chr5 55636737 55640853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3269 177 458 WRKY Transcription Factor Family AT5G45050 25.890 2.25e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3269 - - mtr:MTR_8g027540 1129.39