Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3265 ATGGCTGAAACAATTCTATACAGCGTTGCTACAAGTCTCATTAACAGTTTGGCTTCTGCTGCTTTACGTGAATTTGCACGGATTAATGGTGTTATGGATGAGTTCGAAAGACTTAAGAACACTGTTGAATCTATTAGAGCTGTGTTACTTGATGCTGAGGAGAAACAAGAGCAAAGTCATGCCGTCCAAAATTGGGTAAGAAGGCTTAAAGATGTGCTTAGTCCTGCAGATGACTTGCTAGATGAATTTGTTATTCAAGATATGATACAAAAAAGGGATGAACCTCATCAAAACAAAGTAAAAAAGGTACTTAATCCATTCTCTCCAAACAAATTTGCTTTCCGCCATAACATGGCTAATGAGATTGAGAAAATACAAAAAATGTTTGATGATGTGGTGAGAGATATGACTGGGTTGAATCTAAACCCAAAGGTTGGGGTGGTTGAGAAAACTAACAGTGAATGGAGGGAAACTAGTTCTTGTGTGATAGAATCAGATATCATTGGAAGAGAAGGAGACAAAGAGAAGATTGTAAACTTGTTGAGACAGCCACATGAAGATCAAAATGTCTCTTTGGTTGCTATTGTTGGGATTGGTGGTTTGGGAAAGACAGCTCTCGCTCAATTGGTATACAATGATGGCGAAGTAAGAAAGATTTTTGAAAAGTTTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTCTCAAGAACATGTTGAAGTCATTATTACCTAAGGAAAAAATTGATGATACATTAACATTGGACAACTTGCAAACTATGCTTCGTGACAATTTAAATGGTAAGAGATACTTGTTAGTCCTGGATGACGTTTGGAACGAGAGTTCTGAAAAGTGGGATAAATTGAGGACTTACTTGATGTGTGGTGCTCGGGGCAGTAAGGTTGTAGTGACAACTCGAAGTAGAATAGTGGCAGATAGAATGGGTGTAAAGGATCCATATGTTTTGAGTGGTTTGATTCCAGAAAAATCTTGGAGTTTATTAAAGAAGATTGCATTTGGGGATGACACCATTCGAGTGGATCAAAATATTGAATCAATTGGTAAGAAGATAGCAAAAAAGAGCAACGGAGTTCCATTAGCAATTAGATCGTTGGGAAACATATTACAGGGTAAAAGTGAAGAAAAGGAATGGAATGATGTCTTACGAGGTGATTTTTGGAAATTGTGTGAGGATGAAGATAGCATCTTGCCGGTTCTAAAATTGAGTTACAATAACTTATCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTGTTTCCTAAGGATTGGGAATTCCAGAAGGATGAGTTGGTTCAAATGTGGATGGCACATGGTTATCTTGATTGTCCGGTGGAAGGGAAATGCATTGAAGATGTTGGTAATCAATTCATTCATATTTTTTTGATGAAATCATTCTTCCAAGAACCAAAACGGAAAGAAGATGGTGATTTAATTGGTTTTAAAATGCACGATTTAATGCACGATCTTGCAAAACAAGTAGCTGGTGATGATTGTTGTTACTTGGATAATAACGCAAAAGGATTTCGAGGAAGACCTGTCCATGTATGGGTTGAATTTGACGCATTTTATTTACTGGAATCTTTGGATGCTAGTAGGCTGCGAACTTTGATTGTGCTTTCTTTTAATGATGATGATTTATTGGATAGAGAGAAACAATCACTTATTTCAAGGTTCAAATACTTGCGTGTCTTGAAGTTGTGCGATGATCTTTGTATTGACCTATATGTTTCAATTGAAAAATTGAATCATTTAAGATTTCTTAAATTCTCTTTGGTTTCTACACTAAAAAAGTTTCACAAGTCCATAGAAAATCTTGTTTGTTTACAAATCATACAAGTGAGATTGGATGATAAGGTTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAATTTGAGACGCCTTGCTATTAAACAAGGGAAGTTCAGAGACAAGACACCAGTTGGATTTGGAAAATTGTGCATACCACAACTTAGGAGTGTAAATTTTTCCAAATGGCTTTCTCCTCTCACAAATATTATTGAAATATTTCTTAAATATTGTGAAGGTTTCAAATATCTCCCACCTTTGGAAGGTCTTCCTTTCCTCAAGTCACTTTACTTAGGTGGCCTTCAAGATTTGGAGTACATATATTACGAATTGCCTATCCATGAGCCATTCTTCCCATCTTTGAATAAACTAGAGATCTGGAACTGTAGCAAACTGGTGGGATGGAAGAGGAAGGGAGATGATTTCAATGATATTAACACTTCATCGCATCATCTTTTCCTGCCTCAATTTCCTTGTCTATCTTTTTTTGAATTTTCTTATTGCCCAATGTTGACTCATATGCCTACTTGTCCAAACATTAAGAAATTATTATTGTTGCAAATGGTGTTGTCTACATGGGAAGAAACGCCAAATATAGCACCGTCACAATGCTCACTCAGTTGCACTCCTCTTTCCTTGCAAATTAATGTGGATTTGAAAAACGTCTCACAATATTGGTGGCAAAATCTTACTTCTCTCGAGAATCTTGAGTTTATGTATTTTTCAAGTCAACAATTTCAAGCAATTGAAATCTGGTTGTTTAAGGAAGACTTCAACTATCTTCCTTCATTGCGAAATATTGAATTTTTCGATTGTTCCCACATAAAGGCATTGCCAGATTGGATATGCAAAATCTCATCACTTCAGCATATCAAGATAAGCTATTGCGGTGAATTGGTATTGCTACCTGAAGGAATGACACGTCTTACCAACTTACATACCTTGGAAATCATTGGATGTCGACTCTTAATTGAAGAATATGAGAAAGAAACAAGTGCAACTCGGGCTACAATTGCACACATCCCAAACATAATCATTAAAAAGTGA 2889 0.361 MAETILYSVATSLINSLASAALREFARINGVMDEFERLKNTVESIRAVLLDAEEKQEQSHAVQNWVRRLKDVLSPADDLLDEFVIQDMIQKRDEPHQNKVKKVLNPFSPNKFAFRHNMANEIEKIQKMFDDVVRDMTGLNLNPKVGVVEKTNSEWRETSSCVIESDIIGREGDKEKIVNLLRQPHEDQNVSLVAIVGIGGLGKTALAQLVYNDGEVRKIFEKFMWVCVSDNFDVKTILKNMLKSLLPKEKIDDTLTLDNLQTMLRDNLNGKRYLLVLDDVWNESSEKWDKLRTYLMCGARGSKVVVTTRSRIVADRMGVKDPYVLSGLIPEKSWSLLKKIAFGDDTIRVDQNIESIGKKIAKKSNGVPLAIRSLGNILQGKSEEKEWNDVLRGDFWKLCEDEDSILPVLKLSYNNLSPQQRQCFAYCSLFPKDWEFQKDELVQMWMAHGYLDCPVEGKCIEDVGNQFIHIFLMKSFFQEPKRKEDGDLIGFKMHDLMHDLAKQVAGDDCCYLDNNAKGFRGRPVHVWVEFDAFYLLESLDASRLRTLIVLSFNDDDLLDREKQSLISRFKYLRVLKLCDDLCIDLYVSIEKLNHLRFLKFSLVSTLKKFHKSIENLVCLQIIQVRLDDKVVLSTKVVSKLINLRRLAIKQGKFRDKTPVGFGKLCIPQLRSVNFSKWLSPLTNIIEIFLKYCEGFKYLPPLEGLPFLKSLYLGGLQDLEYIYYELPIHEPFFPSLNKLEIWNCSKLVGWKRKGDDFNDINTSSHHLFLPQFPCLSFFEFSYCPMLTHMPTCPNIKKLLLLQMVLSTWEETPNIAPSQCSLSCTPLSLQINVDLKNVSQYWWQNLTSLENLEFMYFSSQQFQAIEIWLFKEDFNYLPSLRNIEFFDCSHIKALPDWICKISSLQHIKISYCGELVLLPEGMTRLTNLHTLEIIGCRLLIEEYEKETSATRATIAHIPNIIIKK* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3265 962 CDD RX-CC_like 7 127 IPR038005 -
Tpr5g3265 962 Pfam NB-ARC domain 171 415 IPR002182 GO:0043531
Tpr5g3265 962 PANTHER DISEASE RESISTANCE PROTEIN RP 37 670 IPR044974 GO:0006952
Tpr5g3265 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 427 IPR027417 -
Tpr5g3265 962 Pfam Rx N-terminal domain 11 96 IPR041118 -
Tpr5g3265 962 Gene3D - 328 412 IPR042197 -
Tpr5g3265 962 SUPERFAMILY L domain-like 815 936 - -
Tpr5g3265 962 PANTHER OS05G0414200 PROTEIN 37 670 - -
Tpr5g3265 962 Coils Coil 35 55 - -
Tpr5g3265 962 SUPERFAMILY L domain-like 478 846 - -
Tpr5g3265 962 Gene3D - 151 321 IPR027417 -
Tpr5g3265 962 Gene3D Ribonuclease Inhibitor 816 951 IPR032675 -
Tpr5g3265 962 Gene3D Ribonuclease Inhibitor 535 810 IPR032675 -
Tpr5g3265 962 PRINTS Disease resistance protein signature 192 207 - -
Tpr5g3265 962 PRINTS Disease resistance protein signature 267 281 - -
Tpr5g3265 962 PRINTS Disease resistance protein signature 364 378 - -
Tpr5g3265 962 PRINTS Disease resistance protein signature 921 937 - -
Tpr5g3265 962 Gene3D - 413 504 IPR036388 -
Tpr5g3265 962 Gene3D - 10 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3265 Tpr-Chr5 55592106 55601047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3265 175 504 WRKY Transcription Factor Family AT5G45050 27.139 7.99e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3265 - - mtr:MTR_8g027540 1208.36