Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g3220 | ATGAGTAGAAGATGCCCTCCTGATTGTGAATTTGGCCAATATTTTCCAGCCAATAGGAATGAAGATTTTCAGAAAGCCATTAAGCTTTTTGGATTAAGTCACATATTGAGAATTATGAGATCAGTTGAGCCAAATGAAAGACAAGCTGCTGCTGATTCAATTCTCTTTGAAGGCAGTGTTTGGAGATTTTATCCACAAAGTGGACTGCTTAGATATGAGTTGGAGTTGGTTAACACAATATCTTCATCTTTGAGAGAATTACAAATTGCCAATCAACTTTTGGCATTTTTTAAGAATCATGCAAATGAAAGGCCTGCCGGAGACATGAGTGGTATTTCAACTATTCGTGAAAAAGGAGAATCAAGTAATGCATCCAAGGGAAAGGAAGGTGTTGAAGATGGTGAAAAGGGAAAAGGAATTATTATTGAACAAGATGAATCAGAAGACAGTGATGAGGAGGAAGGCCCAAAGAAAAAATGCAGAATTTGA | 489 | 0.3701 | MSRRCPPDCEFGQYFPANRNEDFQKAIKLFGLSHILRIMRSVEPNERQAAADSILFEGSVWRFYPQSGLLRYELELVNTISSSLRELQIANQLLAFFKNHANERPAGDMSGISTIREKGESSNASKGKEGVEDGEKGKGIIIEQDESEDSDEEEGPKKKCRI* | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g3220 | 162 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 91 | IPR004883 | - | |
Tpr5g3220 | 162 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 25-LIKE | 2 | 150 | - | - | |
Tpr5g3220 | 162 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 2 | 150 | - | - | |
Tpr5g3220 | 162 | MobiDBLite | consensus disorder prediction | 121 | 144 | - | - | |
Tpr5g3220 | 162 | MobiDBLite | consensus disorder prediction | 115 | 162 | - | - | |
Tpr5g3220 | 162 | ProSiteProfiles | LOB domain profile. | 1 | 94 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g3220 | Tpr-Chr5 | 55132360 | 55133138 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g3220 | 3 | 104 | AS2 family | AT3G13850 | 36.275 | 3.38e-16 | 72.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Tpr5g3220 | LOB | 4.5e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g3220 | - | - | mtr:MTR_8g009730 | 126.331 |