Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3207 ATGGATCCTCAACTTTTTAATGATTGTACTACAAACAATGAGGCTGAAGACCCCTGTATTATAAACTTACCACCTGGTTACAAATTCATCCCTGATGATGTTGACTTAGTTGATTATTATTTGAAGTATAAGTTAGCTGGTTTTCTCATAAATCCACCAAGAATTAAAGATGTTGATGTTTACAAATATCCTCCTCATGAACTAGAAAAATACTATAAATTCAAAGGAGAGAAAGAAATGTACTTTTTTACTCGAAGAAGTAAGAAATATGAAGAGGGAAGTCGTCCTAATCGCGATGTTAAAAATCATGACGGTATTCATCTGGGTTTTTGGAAGGCTACCGGAAAAGAAAATCCAGTGATGAATAATAATATTGAAGTTGGATTTAAAAGAACTTTAGTCTATTATGGAGGAAAGCAAGACAAGCCTAAACAAAACAACAAGGGAAAAGAAGACAAACCTAAGCAAGAAAAGTCTAATGAGTCAATAAAAACCAATTGGAAAACTAATTGGATCATGCAAGAGTATAGAATTAAAGATCTTACAAGTTCAAGCTCAACTTCTCTTAATATGGATAATTGGGTTTTATGCAAAATTTATGAGCATCAATATGGAATGAAAAAATGTCAATTGGAAGGCCAAACCAACAAACAAGTGGCAATTTCTACTAGTGTGTATATTGCTCCTCAATGCCAACTCAATCAATGTCATCAAACTCAATGCATGCAATCTTCCTTATCACCAAATATGATTGATAATTCACAATTTCAATTCAACCAACAATATTATAAACAAATGCAAGATGTTTCATCAGAATTTCAAATGGTCTCGAATCAACCTAATCATCAATATTCAGAGTCTCAACCAGCGGAAGTTTCGGTTCCATCAAACACAATTGGTATTACACATTGTCAACCTAATCAATATCAATATGAGAATACTCAACAAATGCAAGCTTCTTCGTCATCAACAATGATGGTTACGCCGCAATATCATTTTAATCAACAACATTATTCTCAGGATCAACAAATGCAAGATTCTTTGAAAGAAGACATAGTCTACGATTCACATATGCCACACCATCAAGCTTATCAACCTTGTGAATCTCAAATGAAAGAATATTATTTTGATCCATCGCAGTTTATATAA 1149 0.3281 MDPQLFNDCTTNNEAEDPCIINLPPGYKFIPDDVDLVDYYLKYKLAGFLINPPRIKDVDVYKYPPHELEKYYKFKGEKEMYFFTRRSKKYEEGSRPNRDVKNHDGIHLGFWKATGKENPVMNNNIEVGFKRTLVYYGGKQDKPKQNNKGKEDKPKQEKSNESIKTNWKTNWIMQEYRIKDLTSSSSTSLNMDNWVLCKIYEHQYGMKKCQLEGQTNKQVAISTSVYIAPQCQLNQCHQTQCMQSSLSPNMIDNSQFQFNQQYYKQMQDVSSEFQMVSNQPNHQYSESQPAEVSVPSNTIGITHCQPNQYQYENTQQMQASSSSTMMVTPQYHFNQQHYSQDQQMQDSLKEDIVYDSHMPHHQAYQPCESQMKEYYFDPSQFI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3207 382 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 19 339 - -
Tpr5g3207 382 MobiDBLite consensus disorder prediction 143 162 - -
Tpr5g3207 382 Gene3D NAC domain 33 205 IPR036093 GO:0003677|GO:0006355
Tpr5g3207 382 PANTHER NAC TRANSCRIPTION FACTOR 56 19 339 - -
Tpr5g3207 382 SUPERFAMILY NAC domain 19 200 IPR036093 GO:0003677|GO:0006355
Tpr5g3207 382 ProSiteProfiles NAC domain profile. 23 202 IPR003441 GO:0003677|GO:0006355
Tpr5g3207 382 Pfam No apical meristem (NAM) protein 24 178 IPR003441 GO:0003677|GO:0006355
Tpr5g3207 382 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3207 Tpr-Chr5 55057370 55058864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3207 21 208 NAC Transcription Factor Family AT5G63790 39.062 4.64e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr5g3207 NAM 2.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3207 - - cam:101498998 212.231