Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3150 ATGGCTGAATTTGCTTCAAGCCTCATTCAAAGCTTGGGATCTGCTGCCTTACATGAATTTGCACGGATTAATGGTCTTAAGGATGAGTTGGAAAGGCTTAAGGAGCATGTTGAAACTTGTAAAGCTGTGCTGCTTGATCTTGACGGGAAACAAGAGCAAAGTCATGCTGAACAAAACTTAGTAACAAGGCTCAAAGATGTGCTTATTCCTGCAGATAACTTGCTAGATGAATTTGCTATTCAAGATATGATAAACAAAAGGGATCGAAACAAACTAAAAAAGGTACTTCATCCTTACTCTCTAAAAAAATTAGACATGGCTCATGAGATTGAAAAAATACAAAACAAATTTGATGATGTGGAGAAATATATGTTTGGATTGAATCTAAACCTAAATGTTAGTGCGGTTGAGAAAACTAACAGTGAATGGAGGGAAACTGGTTCTTATGTGCAAGAATCAGAAATAATTGGAAGAGATGATGACAAAGAGAATATTATAAGCTTGTTGAGACAGTCACATGGAGATCCAAATGTCTCTTTCGTTGCTATTGTTGGGATTGGTGGTATGGGAAAGACAACTCTTGCTCAGTTGGTGTATAGTGACGAAAAAGTGCAAAATTTGTTTGAAAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTTTGAAGAACATGTTGAAGTCATTATTACCTAAGGAAAAAATTGATGATACATTAACATTGGACAACTTGCAAAGTATGCTTCGTGACAATTTAAATGGTAAGAGATACTTGTTAGTCCTAGATGACATTTGGAATGAGAGTTCTGAAAAGTGGGATAAATTGAGGACTAACTTGATGTGCGGTGCTCGGGGTAGTAAGGTTGTAGTGACAACTCGAAGTACAATAGTGGCACATAGAATGGGTGTAAAGGATCCATATGTTTTGAGTGGTTTGATTCCAGAAAAATCTTGGAGTTTATTAAAGAAGATTGCATTTGGGGATGATACCATTCAAGTGGATCAAAAAATTGAATCAGTTGGTAAGGAGATAGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATAAGATCATTGGGAAGTATATTAAAGGGTAAAAGTGAAGAAAAGGAATGGAATGATGTCTTACGAGGTGATTTTTGGAAATTGTGTGAGGATAGAGATAGCATCTTGCCGGTTCTAAAATTGAGTTACAATAACTTATCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTGTTTCCTAAAGATTGGGAATTCAAGAAGGATGAGTTGGTTCAAATGTGGATGGCACATGGTTATCTTGATTGTCCAATGGAAGGGAAATGCATTGAAGATGTTGGTAATCAATTCGTTAATATTTTTTTGATGAAATCATTCTTCCAAGAAGCAAAATGGAATGAAGATGGTGATTTAATTGGTTTTAAAATGCACGATTTAATGCATGATCTTGCAAAACAAGTAGCTGGTGATGATTGTTGTTACTTGGATAATAACACAAAAGGATTTCGAGGAAGACCTGTCCATGTATGGGTTGAATTTGACGCATTTTATTTGCTGGAATCTTTGGATGCTAGTAGGCTGCGAACTTTGATTGTGCTTTCTTCTAATGATGGTGATTTATTGGATAGAGAGAAACAATCACTTATTTCAAGGTTCAAATACTTGCGTGTCTTGAAGTTTTGCAATAATCATTATCTTGAGCTATATGTTTCAATTGAAAAATTGAATCATTTAAGATTTCTTAAATTATCTTTGAATTGTAGACTAAAAAAGTTGCACAAGTCCATAGAAAATCTTGTTTGTTTACAAACCATACAAGTGTGGTTGCATCGAAAAAGTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAACTTGAGATACCTTTATATTAGTCAATGGACCTTCAGAGACAAGACACCAGTTGGATTTGGAAAATTGTGCATACCACAACATAGGGATATAAATTTTTCCAAATGGCTTTCTCCTCTTACAAATATTATTGAAATATCTGTTACTTTTTGTAAAGGTCTCAAATATCTCCCACCTTTGGAAGGTCTTCCGTTCCTGAAGTCACTTTACTTAAGTAGCCTTCTTGATTTGGAGTACATATATTACGAAGTGCCTACCCATGAGCCATTCTTCCCATCTTTGAATAAACTAGAGATCAAGACCTGTAACAAACTGGTGGGATGGAAGAGGAAGGGAGATGATTTCAATGTTATTAACACTTCATCACATCATCTTTTGTTGCCTCAATTTCCTTGTCTGTCTTTTTTGGAAATTTGTCGGTGCCCAATGTTGACTCACATGCCTACTTGTCCAAACATTAAGAAATTATCATTGCAAGTGGTGTTGCCTACATGGGAAGAAACGCCAAATATAGCACCGTCACAATGCTCGCTCAGTTGCACTCCTCTTTCCTTGCAAATTAATGTGGATTTGAAAAACGTCTCACAATATTGGTGGCAAAATCTTACTTCTCTCCAGAATCTTGAATTTGTGAGTTTTACCGGTCAACAATTTCAAGCAATTGAAATCTGGTTGTTTAAGGAAGACTTCAACTATCTTCCTTCATTGCGAAATATTCAATTTCACTATTGTAACCGAATAAAGGCATTGCCAGATTGGATATGCAAAATCTCATCACTTCAGCATATCACGATAGAGGATTGCGATCAATTGACATTGCTACCTGAAGGAATGACACGTCTTACCAACTTACATACCTTGGAAATCATTAGATGTCGACTCTTAATTGAAGAATGTCAGAAAGAAACAAGTGCAACTCGGGCTAGAATTGCACACATCCCAAACATAATCATCAAAAGTGATTAG 2853 0.3575 MAEFASSLIQSLGSAALHEFARINGLKDELERLKEHVETCKAVLLDLDGKQEQSHAEQNLVTRLKDVLIPADNLLDEFAIQDMINKRDRNKLKKVLHPYSLKKLDMAHEIEKIQNKFDDVEKYMFGLNLNLNVSAVEKTNSEWRETGSYVQESEIIGRDDDKENIISLLRQSHGDPNVSFVAIVGIGGMGKTTLAQLVYSDEKVQNLFEKSMWVCVSDNFDVKTILKNMLKSLLPKEKIDDTLTLDNLQSMLRDNLNGKRYLLVLDDIWNESSEKWDKLRTNLMCGARGSKVVVTTRSTIVAHRMGVKDPYVLSGLIPEKSWSLLKKIAFGDDTIQVDQKIESVGKEIAEKCKGVPLAIRSLGSILKGKSEEKEWNDVLRGDFWKLCEDRDSILPVLKLSYNNLSPQQRQCFAYCSLFPKDWEFKKDELVQMWMAHGYLDCPMEGKCIEDVGNQFVNIFLMKSFFQEAKWNEDGDLIGFKMHDLMHDLAKQVAGDDCCYLDNNTKGFRGRPVHVWVEFDAFYLLESLDASRLRTLIVLSSNDGDLLDREKQSLISRFKYLRVLKFCNNHYLELYVSIEKLNHLRFLKLSLNCRLKKLHKSIENLVCLQTIQVWLHRKSVLSTKVVSKLINLRYLYISQWTFRDKTPVGFGKLCIPQHRDINFSKWLSPLTNIIEISVTFCKGLKYLPPLEGLPFLKSLYLSSLLDLEYIYYEVPTHEPFFPSLNKLEIKTCNKLVGWKRKGDDFNVINTSSHHLLLPQFPCLSFLEICRCPMLTHMPTCPNIKKLSLQVVLPTWEETPNIAPSQCSLSCTPLSLQINVDLKNVSQYWWQNLTSLQNLEFVSFTGQQFQAIEIWLFKEDFNYLPSLRNIQFHYCNRIKALPDWICKISSLQHITIEDCDQLTLLPEGMTRLTNLHTLEIIRCRLLIEECQKETSATRARIAHIPNIIIKSD* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3150 950 PANTHER DISEASE RESISTANCE PROTEIN RP 31 636 IPR044974 GO:0006952
Tpr5g3150 950 CDD RX-CC_like 4 120 IPR038005 -
Tpr5g3150 950 PRINTS Disease resistance protein signature 180 195 - -
Tpr5g3150 950 PRINTS Disease resistance protein signature 255 269 - -
Tpr5g3150 950 PRINTS Disease resistance protein signature 352 366 - -
Tpr5g3150 950 PRINTS Disease resistance protein signature 908 924 - -
Tpr5g3150 950 Pfam NB-ARC domain 159 403 IPR002182 GO:0043531
Tpr5g3150 950 Gene3D - 137 309 IPR027417 -
Tpr5g3150 950 Gene3D Ribonuclease Inhibitor 803 938 IPR032675 -
Tpr5g3150 950 Gene3D Ribonuclease Inhibitor 523 799 IPR032675 -
Tpr5g3150 950 Pfam Rx N-terminal domain 5 88 IPR041118 -
Tpr5g3150 950 Coils Coil 23 43 - -
Tpr5g3150 950 Gene3D - 401 492 IPR036388 -
Tpr5g3150 950 PANTHER OS05G0414200 PROTEIN 31 636 - -
Tpr5g3150 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 415 IPR027417 -
Tpr5g3150 950 SUPERFAMILY RNI-like 754 925 - -
Tpr5g3150 950 Gene3D - 316 400 IPR042197 -
Tpr5g3150 950 Gene3D - 5 111 - -
Tpr5g3150 950 SUPERFAMILY L domain-like 466 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3150 Tpr-Chr5 54357061 54361050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3150 177 492 WRKY Transcription Factor Family AT5G45050 24.922 1.08e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3150 - - mtr:MTR_8g027540 1111.67