Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3149 ATGGCTGAACGAATTTTATACGGTGTTGCTGAAAGCATCATTAAAAGTTTGGCTTCTGCTGCTTTACGTGAATTTGCACGGATTAATGGTGTTATGGATGAGTTCGAAAGACTTAAGAACACGGTTGAATCTATTAGAGCTGTGTTGCTTGATGCTGAGGAGAAACAAGAGCAAAGTCATGCCATCCAAAACTGGGTAAGAAGGCTTAAAGATGTGCTTATTCCTGCAGATGACTTGCTAGATGAATTTGTTATTCAAGATATGATACAAAAAAGGGATGAACCTCATCAAAACAAAGTAAAAAAGGTACTTAATCCATTCTCTCCAAACAAATTTGCTTTCCGCCATAACATGGCTAATGAGATTGAGAAAATACAAAAAATGTTTGATGATGTGGTGAAAGATATGTCTGTGTTGAATCTAAACTCCAATGTTGTGGTTGTTGAGAAACCTAACAATGAATGGAGGGAAACCAGTTCTTATGTGTTAGAATCAAATATCATTGGAAGAGATGATGACAAAGAGAAGATTGTAAACTTGTTGAGACAATCCCATGGAGATCAGAATGTTTCTTTGGTGGCTATTGTTGGGATGGGTGGTTTGGGAAAGACAACTCTTGCTCAGTTGGTATATAGTGACGACCAAGTTCAAAATTTGTTTGATAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTGTGAAGAACATGTTGGAGTCACTAACCAAGAAAAAAATTGATGATACATTATCATTGGACACCTTGCAAAATATGCTTGGTGGAAATTTATCCGGTAAGAGATACTTGTTAGTCCTAGATGATATTTGGAACGATAGTTTTGAAAAGTGGGATAAATTGTGGACTTGCTTGATGTGTGGTGCTCAAGGAAGTAAGGTTATAGTGACTACTCGTAGTAGAACTGTGGCTCAAACCATGGGTGTATGTGTCCCCTATGCTTTGAATGGGTTGATTCTAGAAGACTCTTGGAGTTTATTAAAGAATATTGCATTTAGGGATGATACCACCGGAGTGAATCAAACTCTCGAATCAACCGGCAAGAAGATAGCAGAAAAGTGCAGAGGCGTTCCATTAGCAATTAGATCATTGGGAGGCATATTAAAGAATAAAAGAGAAGAAAATGAATGGGGTCATGTCTTGCGAGGTGACTTTTGGAAATTGTGCGAGGAAAAAGATAGCATCATGCCGGTCCTAAAATTGAGTTACCGAAACTTGTCACCTCAACAAAAACAGTGTTTTTCTTATTGCTCTTTATATCCTAAGGATTGGGAATTTAAGAAGGGTGAGTTGATTCAAATGTGGATGGCACATGGTTATCTTGAATGTTCAGTCGAAGGGCAATGCATGGAAGATGTTGGTAACCAATTTGTTAATATTTTCTTGATGAAATCATTCTTCCAAGATGCAAAATTGAATGAAGATGGTGATATAAACTGTTTTAAAATGCACGATTTAATGCACGATCTTGCAACACAAGTTGCTGGAAATGATTGTTGTTACTTGGACAATAAAGCAAAAAAAATTATAGGAAGACCAGTGCATGTATCAGTGGAATCAGATGCAGTTTGTTTGTTGGAATCATTGGATGCTAGTAGGCTGCGAACTTTGATTATGTTTACTTCCTATGGTGGCCAAAAGATATGCCATGAAGATGAATTGACAATTATTTCAACATTTAAATACTTACGTGTCTTGAAACTAAAGTATTTATATTTGAGCAAGCTTTTTGGTTACATTGGAAAATTGAAGCATTTAAGATATCTTCACTTGTTAGAGTGTGGGGGACTAGAAAGTGGTTCCAAATCTATAGGCAATCTATTTTGTTTACAAACAATAAAAGTTTCATTGGGAATTGGTGCTGAAGTTGTACTTTCTACAAAAGTTATCTCAAAATTAATCAATTTGAGACATCTTGAGATTAATACTCAGACCTTCAAAGATGAGCAACCAGTTAGATTTGGTAAATTGAGTATACATCATCACAAAGGTGTGACTTTTTCCAAATGGATTTCTCCACTCACAAATATTGTTGAAATATCTCTTAGTTATTGCAAAGCTTTCCGATACCTCCCACCGGTGGAACGTCTTCCTTTCCTTAAGTCACTTAAGTTACGCTGCATTAATTATTTGGAGTACATATATTACGAAGAGCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGAGCCTACACATTTATAAATGTGATAAGCTGAGGGGATGGAGAAGGATGGGAGATGATTTAAATGATATTAACTCTTCACATCATCTCTTGTTGCCTCAGTTTCCTTGTCTATCTAAATTGGCAGTTAGAGAGTGTCGGATGCTGACTTGCATGCCTACTTTTCCAAACATTAAGAGCTTGTCATTGAATTACTGCAGTGTAGAGATATTGCAAGCAACACTATGTAGTGCAGCTTCACAATACTCAATTGGTTGCACTCCTCTTTCCATGCTCAAATCCTTGCGCATTAATGAAACCATTATGGATATGAAAAACGTCCCACAAGATTGGTTGAAAAATTGTACTTCTCTTGAGAATCTTGAGTTTGACGATCTTTCAAGTCAATATTTTCAAGTAATTGAAATATGGTTTAAAGATGACCTCATCCGTTTTTCTTCTCTCCAAAAAATCACCTTTCAATTTTGTATGGATCTAAAGGCATTGCCAGATTGGATATGCAACATCTTATCACTTCAGCACATCAAGATAGACAATTGCACAGATCTGGTATTGCTGCCCAAAGGAATGCATCGTCTTACCAACTTACGCACCTTAGAAATCATTGTATGTCCACTCTTAGGTGAAGCATGCCGGACAGAAACAAGTGCAACTTGGCCTAAAATTGCTCAAATCCCAAACATAATCATAAAAAGTGATTGA 2916 0.3656 MAERILYGVAESIIKSLASAALREFARINGVMDEFERLKNTVESIRAVLLDAEEKQEQSHAIQNWVRRLKDVLIPADDLLDEFVIQDMIQKRDEPHQNKVKKVLNPFSPNKFAFRHNMANEIEKIQKMFDDVVKDMSVLNLNSNVVVVEKPNNEWRETSSYVLESNIIGRDDDKEKIVNLLRQSHGDQNVSLVAIVGMGGLGKTTLAQLVYSDDQVQNLFDKSMWVCVSDNFDVKTIVKNMLESLTKKKIDDTLSLDTLQNMLGGNLSGKRYLLVLDDIWNDSFEKWDKLWTCLMCGAQGSKVIVTTRSRTVAQTMGVCVPYALNGLILEDSWSLLKNIAFRDDTTGVNQTLESTGKKIAEKCRGVPLAIRSLGGILKNKREENEWGHVLRGDFWKLCEEKDSIMPVLKLSYRNLSPQQKQCFSYCSLYPKDWEFKKGELIQMWMAHGYLECSVEGQCMEDVGNQFVNIFLMKSFFQDAKLNEDGDINCFKMHDLMHDLATQVAGNDCCYLDNKAKKIIGRPVHVSVESDAVCLLESLDASRLRTLIMFTSYGGQKICHEDELTIISTFKYLRVLKLKYLYLSKLFGYIGKLKHLRYLHLLECGGLESGSKSIGNLFCLQTIKVSLGIGAEVVLSTKVISKLINLRHLEINTQTFKDEQPVRFGKLSIHHHKGVTFSKWISPLTNIVEISLSYCKAFRYLPPVERLPFLKSLKLRCINYLEYIYYEEPILHESFFPSLESLHIYKCDKLRGWRRMGDDLNDINSSHHLLLPQFPCLSKLAVRECRMLTCMPTFPNIKSLSLNYCSVEILQATLCSAASQYSIGCTPLSMLKSLRINETIMDMKNVPQDWLKNCTSLENLEFDDLSSQYFQVIEIWFKDDLIRFSSLQKITFQFCMDLKALPDWICNILSLQHIKIDNCTDLVLLPKGMHRLTNLRTLEIIVCPLLGEACRTETSATWPKIAQIPNIIIKSD* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3149 971 CDD RX-CC_like 7 127 IPR038005 -
Tpr5g3149 971 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Tpr5g3149 971 PANTHER DISEASE RESISTANCE PROTEIN RP 37 795 IPR044974 GO:0006952
Tpr5g3149 971 Gene3D - 412 503 IPR036388 -
Tpr5g3149 971 Gene3D - 10 131 - -
Tpr5g3149 971 Gene3D - 327 411 IPR042197 -
Tpr5g3149 971 Coils Coil 35 55 - -
Tpr5g3149 971 Pfam Rx N-terminal domain 11 96 IPR041118 -
Tpr5g3149 971 SUPERFAMILY RNI-like 762 946 - -
Tpr5g3149 971 SUPERFAMILY L domain-like 491 809 - -
Tpr5g3149 971 PRINTS Disease resistance protein signature 192 207 - -
Tpr5g3149 971 PRINTS Disease resistance protein signature 266 280 - -
Tpr5g3149 971 PRINTS Disease resistance protein signature 363 377 - -
Tpr5g3149 971 PRINTS Disease resistance protein signature 590 606 - -
Tpr5g3149 971 Gene3D - 154 319 IPR027417 -
Tpr5g3149 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
Tpr5g3149 971 Gene3D Ribonuclease Inhibitor 555 793 IPR032675 -
Tpr5g3149 971 Gene3D Ribonuclease Inhibitor 794 957 IPR032675 -
Tpr5g3149 971 PANTHER OS05G0414200 PROTEIN 37 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3149 Tpr-Chr5 54336213 54340130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3149 189 503 WRKY Transcription Factor Family AT5G45050 24.768 5.40e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3149 - - mtr:MTR_8g027540 1290.4