Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3145 ATGGCTGAAACAATTCTATACAGCGTTGCTACAAGTCTCATTAACAGTTTGGCTTCTGCTGCCTTACATGAATTTGCACGGATTAATGGTGTTATGGGTGAGTTGGAAAGACTTAAGAACACAGTTGAATCTATTAAAGCTGTGTTGCTTGATGCTGACGAAAAACAAGAGAAAAGTCATGCTGTACAAAACTGGGTAAGAAGGCTTAAAGATGTGCTTATTCCTGCAGATGACTTGCTAGATGAATTTCTTATTCAAGATATGATACAAAAAAGGGATGAACCTCATCGAAACAAAGTAAAAAAGGTACTTCGTTCCTTCTCTCCAAACAAATTTGCTTTGCGCCATAAAATGACTAATGAGATTGAGAAAATACAAAAAATGTTTGATGATGTGGTGAGAGATATGACTGGGTTGAATCTAAACCCAAAGGTTGGGGTGGTTGAGAAAACTAACAATGAATGGAGGGAAACCAGTTCTTATGTGTTAGAATCAAATATCATTGGAAGAGATGATGACAAAGAGAAGATTGTAAGCTTGTTGAGACAATCCCATGGAGATCAGAATGTTTCTTTGGTGGCTATTGTTGGGATTGGTGGTTTGGGAAAGACAACTCTTGCTCAGTTGGTATATAGTGACGACCAAGTTCAAAATTTGTTTGATAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTTTGAAGAACATGTTGAAGTCATTATTACCTAAGGAAAAAATTGATGATACATTAACATTTGACAACTTGCAAACTATGCTTCGTGACAATTTAAATGGTAAGAGATACTTGTTTGTCCTAGATGACATTTGGAATGAGAGTTCTGAAAAGTGGGATAAATTGAGGACTTACTTGATGTGTGGTGCTCGGGGCAGTAAGGTTGTAGTGACAACTCGAAGTACAATAGTGGCACAGAGAATGGGTGTAAAGGACCCATATGTTTTGAGTGGTTTGATTCCAGAAAAATCTTGGAGTTTATTAAAGAAGATTGCATTTGGGGATGACACCATTCGAGTGGATCAAAATATTGAATCAATTGGTAAGAAGATAGCAGAAAAGTGCAACGGAGTTCCATTAGCAATTAGATCGTTGGGAAGCATATTACAGGGTAAAAGTGAAGAAAAGGAATGGAATGATGTCTTACGAGGTGATTTCTGGAAATTGTGTGAGGATAAAGATAGCATCTTGCCGGTTCTAAAATTGAGTTACAATAACTTATCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTGTTTCCTAAAGATTGGGAATTCGAGAAGGATGAGTTGGTTCAAATGTGGATGGCACATGGTTATCTTGATTGTCCGATGGAAGGGAAATGCATTGAAGATGATGGTAATCAATTCGTTAATATTTTTTTGATGAAATCATTCTTCCAAGAACCAAAATGGAATGAAGATGGTGATTTAATTGGTTTTAAAATGCACGATTTAATGCATGATCTTGCAAAACAAGTAGCTGGTGATGATTGTTGTTACTTGGATAATAACACAAAAAGATTTCGAGGAAGACCTGTCCATGTATGGGTTGAATTTGACGCATTTTATTTGCTGGAATCTTTGGATGCTAGTAGGTTGCGAACTTTGATTGTGCTTTCTTTTAATGATGATGTTTTTTTGGATAGAGAGAAACAATCACTTATTTCAAGGTTCAAATACTTGCGTGTCTTGAAGTTGTGCGAAAATCGTTATATTGAGCTATATGTTTCAATTGAAAAATTGAATCATTTAAGATTTCTTAAATTTTCTTTGAATTGTAGACTAAAAAAGTTGCACAAGTACATAGAAAATCTTGTTTGTTTACAAACCATACAAGTGTGGTTGCATCCAAAAAGTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAACTTGAGATACCTTTATATTGGTCATTGGACCTTCAGAGACAAGACACCAGTTGGATTTGGAAAATTGTGCATACCACAACATAGGGATATAAATTTTTCCAAATGGCTTTCTCCTCTTACAAATATTATTGAAATATCTCTTGATAGTTGTGAAGGTTTCAAATATCTCCCACCTTTGGAAGGTCTTCCGTTCCTGAAGTCACTTTACTTAAGTAGCCTTGATGATTTGGAGTACATATATTACGAATTGCCTATCCATGAGCCATTCTTCCCATCTTTGAAGAGACTAGAGATTCAGATCTGTCCCAAACTGGTGGGATGGAAGAGGATGGGAGATGATTTCAATGATATTAACACTTCATCACATCATCTTTTCCTGCCTCAATTTCCTTGTCTATCTTTTTTTGAATTTCCTTATTGCCCAATGTTGACTCGTATGCCTACTTGTCCAAACATTAAGAAATTATTATTGCAAGTGGAGTGGACATCAGAAGAAACGCCAAATATAGCACCGTCACAATGCTCGCTCAGTTGCACTCCTCTTTCCTTGCAAATTAATGTGGATTTGAAAAACGTCTCACAATATTGGTGGCAAAATCTTACTTCTCTCCAGAATCTTGAATTTGTGGGTTTTACCGGTCAACAATTTCAAGCAATTGAAAATTGGTTGTTTAAAGAAGACTTCAACTATCTTCCTTCATTGCGAAATATTGAATTTCGACATTCTTACTACATAAACGCATTGCCAGATTGGATATGCAAAATCTCATCACTTCAGCATATCAAGATAGAATATTGCAGAAAATTGACATCGCTGCCTGAAGGAATGACACGTCTTACCAACTTACATACCTTGGAAATCATTAAATGTCCACTCTTAATTGAAGAATGTCAGAAAGAAACAAGTGCAACTCGGCCTACAATTGCACACATCCCAAACATAATCATTGAAAAGTGA 2883 0.3587 MAETILYSVATSLINSLASAALHEFARINGVMGELERLKNTVESIKAVLLDADEKQEKSHAVQNWVRRLKDVLIPADDLLDEFLIQDMIQKRDEPHRNKVKKVLRSFSPNKFALRHKMTNEIEKIQKMFDDVVRDMTGLNLNPKVGVVEKTNNEWRETSSYVLESNIIGRDDDKEKIVSLLRQSHGDQNVSLVAIVGIGGLGKTTLAQLVYSDDQVQNLFDKSMWVCVSDNFDVKTILKNMLKSLLPKEKIDDTLTFDNLQTMLRDNLNGKRYLFVLDDIWNESSEKWDKLRTYLMCGARGSKVVVTTRSTIVAQRMGVKDPYVLSGLIPEKSWSLLKKIAFGDDTIRVDQNIESIGKKIAEKCNGVPLAIRSLGSILQGKSEEKEWNDVLRGDFWKLCEDKDSILPVLKLSYNNLSPQQRQCFAYCSLFPKDWEFEKDELVQMWMAHGYLDCPMEGKCIEDDGNQFVNIFLMKSFFQEPKWNEDGDLIGFKMHDLMHDLAKQVAGDDCCYLDNNTKRFRGRPVHVWVEFDAFYLLESLDASRLRTLIVLSFNDDVFLDREKQSLISRFKYLRVLKLCENRYIELYVSIEKLNHLRFLKFSLNCRLKKLHKYIENLVCLQTIQVWLHPKSVLSTKVVSKLINLRYLYIGHWTFRDKTPVGFGKLCIPQHRDINFSKWLSPLTNIIEISLDSCEGFKYLPPLEGLPFLKSLYLSSLDDLEYIYYELPIHEPFFPSLKRLEIQICPKLVGWKRMGDDFNDINTSSHHLFLPQFPCLSFFEFPYCPMLTRMPTCPNIKKLLLQVEWTSEETPNIAPSQCSLSCTPLSLQINVDLKNVSQYWWQNLTSLQNLEFVGFTGQQFQAIENWLFKEDFNYLPSLRNIEFRHSYYINALPDWICKISSLQHIKIEYCRKLTSLPEGMTRLTNLHTLEIIKCPLLIEECQKETSATRPTIAHIPNIIIEK* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3145 960 CDD RX-CC_like 7 127 IPR038005 -
Tpr5g3145 960 Gene3D - 150 321 IPR027417 -
Tpr5g3145 960 Pfam Rx N-terminal domain 11 93 IPR041118 -
Tpr5g3145 960 PANTHER DISEASE RESISTANCE PROTEIN RP 35 648 IPR044974 GO:0006952
Tpr5g3145 960 PANTHER DISEASE RESISTANCE PROTEIN RP 679 857 IPR044974 GO:0006952
Tpr5g3145 960 Gene3D - 10 132 - -
Tpr5g3145 960 PANTHER OS05G0414200 PROTEIN 679 857 - -
Tpr5g3145 960 PANTHER OS05G0414200 PROTEIN 35 648 - -
Tpr5g3145 960 Pfam NB-ARC domain 171 415 IPR002182 GO:0043531
Tpr5g3145 960 SUPERFAMILY L domain-like 477 850 - -
Tpr5g3145 960 PRINTS Disease resistance protein signature 192 207 - -
Tpr5g3145 960 PRINTS Disease resistance protein signature 267 281 - -
Tpr5g3145 960 PRINTS Disease resistance protein signature 364 378 - -
Tpr5g3145 960 PRINTS Disease resistance protein signature 919 935 - -
Tpr5g3145 960 Gene3D - 328 412 IPR042197 -
Tpr5g3145 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 427 IPR027417 -
Tpr5g3145 960 Coils Coil 35 55 - -
Tpr5g3145 960 Gene3D - 413 504 IPR036388 -
Tpr5g3145 960 Gene3D Ribonuclease Inhibitor 536 815 IPR032675 -
Tpr5g3145 960 Gene3D Ribonuclease Inhibitor 817 949 IPR032675 -
Tpr5g3145 960 SUPERFAMILY RNI-like 830 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3145 Tpr-Chr5 54273509 54281452 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3145 189 603 WRKY Transcription Factor Family AT5G45050 25.814 1.71e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3145 - - mtr:MTR_8g027540 1204.12